衰减全反射傅立叶变换红外光谱法在人类血清中的应用:验证方法,为储存和保存提供有效策略

IF 2.7 3区 化学 Q2 CHEMISTRY, ANALYTICAL Vibrational Spectroscopy Pub Date : 2024-10-04 DOI:10.1016/j.vibspec.2024.103741
Juthamas Jaimanee , Patutong Chatchawal , Molin Wongwattanakul , Supranee Phantanawiboon , Chanvit Leelayuwat , Amonrat Jumnainsong
{"title":"衰减全反射傅立叶变换红外光谱法在人类血清中的应用:验证方法,为储存和保存提供有效策略","authors":"Juthamas Jaimanee ,&nbsp;Patutong Chatchawal ,&nbsp;Molin Wongwattanakul ,&nbsp;Supranee Phantanawiboon ,&nbsp;Chanvit Leelayuwat ,&nbsp;Amonrat Jumnainsong","doi":"10.1016/j.vibspec.2024.103741","DOIUrl":null,"url":null,"abstract":"<div><div>The serum is one of the biological specimens that have been extensively studied as biomarkers and is recognized as an effective tool for screening and diagnosing a variety of diseases. Attenuated Total Reflectance-Fourier Transform Infrared Spectroscopy (ATR-FTIR) is a practical technique utilized in investigating characteristic spectra in infectious diseases cancer, and metabolic status. However, the pre-analytical procedure as storage condition is a crucial phase that directly impacts the accuracy of the result. In this study, we intend to investigate the effects of serum stabilization under both identical and distinct storage conditions on the FTIR spectral patterns, intensity variations, and macromolecule composition. The ten serum samples were stored in 3 different conditions including 4 °C, −20°C, and −80°C for six different time intervals (7, 14, 21, 28, 56, and 84 days). The spectra were obtained by ATR-FTIR spectroscopy. The serum stabilization was studied in two investigations: one focusing on the stability of serum under identical conditions over six different time intervals, and the other examining the stability of serum stored under three distinct conditions. Principal Component Analysis (PCA) and Area Under the Peak (AUP) were used to investigate clusters in different sets of data across five spectral ranges. The macromolecule composition was identified in conjunction with the intensity measurements. The results showed that the same conditions remained stable across six different time intervals, as indicated by the consistent PCA results. In contrast, the stabilization of serum under different temperature condition showed different major intensities across the five selected positive bands, including 1781 cm<sup>−1</sup>, 1740 cm<sup>−1</sup> 1727 cm<sup>−1</sup> corresponding to lipid region (1800–1700 cm<sup>−1</sup>), and Amide region (1700 −1500 cm<sup>−1</sup>) at 1646 cm<sup>−1</sup>, and 1632 cm<sup>−1</sup>, when the serum was stored over 28 days. This might involve lipid peroxidation-induced changes in the secondary structure of proteins. Our findings indicated that serum should be stored at −80°C to ensure stabilization and achieve the highest intensity. Additionally, preserving serum under consistent conditions was crucial to minimize variability and prevent external factors from affecting the results.</div></div>","PeriodicalId":23656,"journal":{"name":"Vibrational Spectroscopy","volume":"135 ","pages":"Article 103741"},"PeriodicalIF":2.7000,"publicationDate":"2024-10-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Application of Attenuated Total Reflectance Fourier-Transform Infrared Spectroscopy in Human Sera: Validate the method for contributing effective strategy for the storage and preservation\",\"authors\":\"Juthamas Jaimanee ,&nbsp;Patutong Chatchawal ,&nbsp;Molin Wongwattanakul ,&nbsp;Supranee Phantanawiboon ,&nbsp;Chanvit Leelayuwat ,&nbsp;Amonrat Jumnainsong\",\"doi\":\"10.1016/j.vibspec.2024.103741\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>The serum is one of the biological specimens that have been extensively studied as biomarkers and is recognized as an effective tool for screening and diagnosing a variety of diseases. Attenuated Total Reflectance-Fourier Transform Infrared Spectroscopy (ATR-FTIR) is a practical technique utilized in investigating characteristic spectra in infectious diseases cancer, and metabolic status. However, the pre-analytical procedure as storage condition is a crucial phase that directly impacts the accuracy of the result. In this study, we intend to investigate the effects of serum stabilization under both identical and distinct storage conditions on the FTIR spectral patterns, intensity variations, and macromolecule composition. The ten serum samples were stored in 3 different conditions including 4 °C, −20°C, and −80°C for six different time intervals (7, 14, 21, 28, 56, and 84 days). The spectra were obtained by ATR-FTIR spectroscopy. The serum stabilization was studied in two investigations: one focusing on the stability of serum under identical conditions over six different time intervals, and the other examining the stability of serum stored under three distinct conditions. Principal Component Analysis (PCA) and Area Under the Peak (AUP) were used to investigate clusters in different sets of data across five spectral ranges. The macromolecule composition was identified in conjunction with the intensity measurements. The results showed that the same conditions remained stable across six different time intervals, as indicated by the consistent PCA results. In contrast, the stabilization of serum under different temperature condition showed different major intensities across the five selected positive bands, including 1781 cm<sup>−1</sup>, 1740 cm<sup>−1</sup> 1727 cm<sup>−1</sup> corresponding to lipid region (1800–1700 cm<sup>−1</sup>), and Amide region (1700 −1500 cm<sup>−1</sup>) at 1646 cm<sup>−1</sup>, and 1632 cm<sup>−1</sup>, when the serum was stored over 28 days. This might involve lipid peroxidation-induced changes in the secondary structure of proteins. Our findings indicated that serum should be stored at −80°C to ensure stabilization and achieve the highest intensity. Additionally, preserving serum under consistent conditions was crucial to minimize variability and prevent external factors from affecting the results.</div></div>\",\"PeriodicalId\":23656,\"journal\":{\"name\":\"Vibrational Spectroscopy\",\"volume\":\"135 \",\"pages\":\"Article 103741\"},\"PeriodicalIF\":2.7000,\"publicationDate\":\"2024-10-04\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Vibrational Spectroscopy\",\"FirstCategoryId\":\"92\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0924203124000948\",\"RegionNum\":3,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"CHEMISTRY, ANALYTICAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Vibrational Spectroscopy","FirstCategoryId":"92","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0924203124000948","RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"CHEMISTRY, ANALYTICAL","Score":null,"Total":0}
引用次数: 0

摘要

血清是作为生物标记物被广泛研究的生物标本之一,是筛查和诊断各种疾病的有效工具。衰减全反射-傅立叶变换红外光谱法(ATR-FTIR)是一种实用技术,可用于研究传染病、癌症和新陈代谢状况的特征光谱。然而,分析前的存储条件是直接影响结果准确性的关键阶段。在本研究中,我们打算研究在相同和不同储存条件下稳定血清对傅立叶变换红外光谱模式、强度变化和大分子组成的影响。十份血清样品分别在 4°C、-20°C 和 -80°C 三种不同条件下储存了六种不同的时间间隔(7 天、14 天、21 天、28 天、56 天和 84 天)。光谱由 ATR-FTIR 光谱仪获得。对血清稳定性的研究分为两项:一项侧重于在相同条件下六个不同时间间隔内血清的稳定性,另一项则考察了在三种不同条件下储存血清的稳定性。研究人员使用主成分分析法(PCA)和峰下面积法(AUP)研究了五种光谱范围内不同数据集群。结合强度测量结果确定了大分子的组成。结果表明,在六个不同的时间间隔内,相同的条件保持稳定,这一点从一致的 PCA 结果可以看出。相反,在不同温度条件下,血清的稳定性在五个选定的阳性条带上显示出不同的主要强度,包括 1781 cm-1、1740 cm-1 1727 cm-1(对应于脂质区(1800-1700 cm-1)),以及 1646 cm-1 和 1632 cm-1 的酰胺区(1700 -1500 cm-1)。这可能与脂质过氧化引起的蛋白质二级结构变化有关。我们的研究结果表明,血清应保存在 -80°C 温度下,以确保其稳定性并达到最高强度。此外,在一致的条件下保存血清对减少变异性和防止外部因素影响结果至关重要。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Application of Attenuated Total Reflectance Fourier-Transform Infrared Spectroscopy in Human Sera: Validate the method for contributing effective strategy for the storage and preservation
The serum is one of the biological specimens that have been extensively studied as biomarkers and is recognized as an effective tool for screening and diagnosing a variety of diseases. Attenuated Total Reflectance-Fourier Transform Infrared Spectroscopy (ATR-FTIR) is a practical technique utilized in investigating characteristic spectra in infectious diseases cancer, and metabolic status. However, the pre-analytical procedure as storage condition is a crucial phase that directly impacts the accuracy of the result. In this study, we intend to investigate the effects of serum stabilization under both identical and distinct storage conditions on the FTIR spectral patterns, intensity variations, and macromolecule composition. The ten serum samples were stored in 3 different conditions including 4 °C, −20°C, and −80°C for six different time intervals (7, 14, 21, 28, 56, and 84 days). The spectra were obtained by ATR-FTIR spectroscopy. The serum stabilization was studied in two investigations: one focusing on the stability of serum under identical conditions over six different time intervals, and the other examining the stability of serum stored under three distinct conditions. Principal Component Analysis (PCA) and Area Under the Peak (AUP) were used to investigate clusters in different sets of data across five spectral ranges. The macromolecule composition was identified in conjunction with the intensity measurements. The results showed that the same conditions remained stable across six different time intervals, as indicated by the consistent PCA results. In contrast, the stabilization of serum under different temperature condition showed different major intensities across the five selected positive bands, including 1781 cm−1, 1740 cm−1 1727 cm−1 corresponding to lipid region (1800–1700 cm−1), and Amide region (1700 −1500 cm−1) at 1646 cm−1, and 1632 cm−1, when the serum was stored over 28 days. This might involve lipid peroxidation-induced changes in the secondary structure of proteins. Our findings indicated that serum should be stored at −80°C to ensure stabilization and achieve the highest intensity. Additionally, preserving serum under consistent conditions was crucial to minimize variability and prevent external factors from affecting the results.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Vibrational Spectroscopy
Vibrational Spectroscopy 化学-分析化学
CiteScore
4.70
自引率
4.00%
发文量
103
审稿时长
52 days
期刊介绍: Vibrational Spectroscopy provides a vehicle for the publication of original research that focuses on vibrational spectroscopy. This covers infrared, near-infrared and Raman spectroscopies and publishes papers dealing with developments in applications, theory, techniques and instrumentation. The topics covered by the journal include: Sampling techniques, Vibrational spectroscopy coupled with separation techniques, Instrumentation (Fourier transform, conventional and laser based), Data manipulation, Spectra-structure correlation and group frequencies. The application areas covered include: Analytical chemistry, Bio-organic and bio-inorganic chemistry, Organic chemistry, Inorganic chemistry, Catalysis, Environmental science, Industrial chemistry, Materials science, Physical chemistry, Polymer science, Process control, Specialized problem solving.
期刊最新文献
Diagnosis of corn leaf diseases by FTIR spectroscopy combined with machine learning Evaluating the thermal stability of hazelnut oil in comparison with common edible oils in Turkey using ATR infrared spectroscopy New insights of emerald geographic origin determination based on the infrared spectroscopy of D2O and HDO molecules Use of a rugged mid-infrared spectrometer for in situ process analysis of liquids Discovery of calcium sulfate at different hydration states on Mars - based on perseverance SHERLOC analysis
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1