为解剖结构和病变建立通用计算机断层扫描图像分割模型

Xi Ouyang, Dongdong Gu, Xuejian Li, Wenqi Zhou, Qianqian Chen, Yiqiang Zhan, Xiang Sean Zhou, Feng Shi, Zhong Xue, Dinggang Shen
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引用次数: 0

摘要

利用特定任务数据开发的深度学习模型不胜枚举,但它们忽略了不同任务之间的内在联系。通过联合学习各种分割任务,我们证明了通用医学图像分割模型可以提高计算机断层扫描(CT)体积的分割性能。所提出的通用 CT 图像分割(gCIS)模型利用基于变压器的通用编码器来处理所有任务,并结合自动路径模块来进行基于任务提示的解码。gCIS 可通过文本提示输入,利用解码网络的自动路径模块自动执行各种分割任务,平均骰子系数达到 82.84%。此外,所提出的自动路径路由机制允许在部署过程中对网络进行参数剪枝,gCIS还能在保持出色性能的同时,以最少的训练样本快速适应未见任务。欧阳曦等人开发了一种用于计算机断层扫描图像多任务分割的统一机器学习模型。在整理了一个由超过 35K 张扫描图像组成的大型数据集后,该模型在各种任务中都取得了优于最新技术的结果。
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Towards a general computed tomography image segmentation model for anatomical structures and lesions
Numerous deep-learning models have been developed using task-specific data, but they ignore the inherent connections among different tasks. By jointly learning a wide range of segmentation tasks, we prove that a general medical image segmentation model can improve segmentation performance for computerized tomography (CT) volumes. The proposed general CT image segmentation (gCIS) model utilizes a common transformer-based encoder for all tasks and incorporates automatic pathway modules for task prompt-based decoding. It is trained on one of the largest datasets, comprising 36,419 CT scans and 83 tasks. gCIS can automatically perform various segmentation tasks using automatic pathway modules of decoding networks through text prompt inputs, achieving an average Dice coefficient of 82.84%. Furthermore, the proposed automatic pathway routing mechanism allows for parameter pruning of the network during deployment, and gCIS can also be quickly adapted to unseen tasks with minimal training samples while maintaining great performance. Xi Ouyang et al. developed a unified machine-learning model for multi-task segmentation in computed tomography images. After collating a large dataset composed of over 35K scans, the model presented superior results compared to the state-of-the-art in various tasks.
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