评估 Z/E 光异构化分子开关效率的预测性筛选工具

IF 5.4 1区 物理与天体物理 Q1 PHYSICS, MULTIDISCIPLINARY Communications Physics Pub Date : 2024-10-10 DOI:10.1038/s42005-024-01821-4
Cristina Garcia-Iriepa, Luis Manuel Frutos, Marco Marazzi
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引用次数: 0

摘要

评估 Z/E 光异构化效率是设计光活性分子设备的一项基本任务。然而,只有采用大量昂贵的计算方法才能正确描述这种光活性。在本研究中,我们介绍了一种筛选分子开关的光诱导 Z/E 异构化效率的预测工具,它基于三个关键特性:基态最小值的结构、填充光亮态的电子转变的性质,以及光亮态与低能量态之间是否存在交叉。我们的方法允许通过少量且经济实惠的计算来评估这些特性,从而有可能筛选出大量的光开关。在介绍了形式方面的问题后,我们将这一工具应用于典型光开关(视网膜、绿色荧光蛋白、半硫靛蓝、络氨化合物和二苯乙烯化合物)的模型系统,包括衍生物。通过与现有实验数据的比较,验证了我们的方法。顺反光异构化是生物学和材料科学中许多过程的关键过程,但只有仔细和耗时的量子化学方法才能详细描述这种反应。这里介绍的是一种预测工具,只需少量且经济实惠的计算,就能评估范例光开关和改良光开关的效率。
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A predictive screening tool to evaluate the efficiency of Z/E photoisomerizable molecular switches
The evaluation of the Z/E photoisomerization efficiency is an essential task to design photoactive molecular devices. Nevertheless, this photoreactivity can be correctly described only by applying extensive and expensive computational methods. In this study, a predictive tool to screen the photoinduced Z/E isomerization efficiency of molecular switches is presented, based on three key properties: the structure of the ground state minimum, the nature of the electronic transition populating the optically bright state, and the presence of crossings between the optically bright state and the one lower in energy. Our methodology allows evaluating these properties by few and affordable calculations, potentially enabling the screening of large sets of photoswitches. After presenting the formal aspects, the tool is applied to model systems of paradigmatic classes of photoswitches (retinal, green fluorescent protein, hemithioindigo, chiroptical, and stilbene compounds) including derivatives. A comparison with the available experimental data is performed to validate our approach. Cis-trans photoisomerization is a key process for many processes in biology and materials science, but only careful and time-consuming quantum chemistry methods can describe such reaction in detail. Here, a predictive tool is presented requiring few and affordable calculations, evaluating the efficiency of paradigmatic and modified photoswitches.
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来源期刊
Communications Physics
Communications Physics Physics and Astronomy-General Physics and Astronomy
CiteScore
8.40
自引率
3.60%
发文量
276
审稿时长
13 weeks
期刊介绍: Communications Physics is an open access journal from Nature Research publishing high-quality research, reviews and commentary in all areas of the physical sciences. Research papers published by the journal represent significant advances bringing new insight to a specialized area of research in physics. We also aim to provide a community forum for issues of importance to all physicists, regardless of sub-discipline. The scope of the journal covers all areas of experimental, applied, fundamental, and interdisciplinary physical sciences. Primary research published in Communications Physics includes novel experimental results, new techniques or computational methods that may influence the work of others in the sub-discipline. We also consider submissions from adjacent research fields where the central advance of the study is of interest to physicists, for example material sciences, physical chemistry and technologies.
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