人类水蒸发蛋白-1中保守的H键网络是原生折叠和寡聚化所必需的。

IF 3.2 3区 生物学 Q2 BIOPHYSICS Biophysical journal Pub Date : 2024-10-17 DOI:10.1016/j.bpj.2024.10.011
Philip Drewniak,Peng Xiao,Vladimir Ladizhansky,Ana-Nicoleta Bondar,Leonid S Brown
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引用次数: 0

摘要

水蒸发蛋白(AQPs)是一种α螺旋跨膜蛋白,能以高选择性和高渗透性通过膜传导水分。对于人类 AQP1 而言,除了功能性的 Asn-Pro-Ala 基序和孔内的芳香/Arg 选择性过滤器外,还有几个高度保守的残基形成了一个广阔的氢键网络。之前的固态核磁共振研究和结构保护分析详细说明了哪些残基可能参与了这一网络。我们通过突变参与氢键连接的侧链或骨架来探索这一网络,产生了以下突变体:N127A、V133P、E142A、T187A、R195A、S196A。通过衰减全反射傅立叶变换红外光谱以及温度升高时的氢/氘交换,对这些突变体的折叠和稳定性进行了评估。我们发现,在室温下,将所选残基替换为丙氨酸会导致部分不稳定或完全折叠错误,后者在 N127A、V133P、T187A 和 R195A 突变体中最为明显。对酰胺 I 波段的解卷积分析显示出相当大的二级结构偏差,一些突变体表现出新的无规线圈和 β 片状结构。我们还发现,其中一些突变可能会破坏人类 AQP1 的寡聚化。BN-PAGE 和 DLS 数据证明了大多数突变体中四聚体的缺失,而只有 S196A 突变体保留了四聚体组织。对野生型、N127A、E142A 和 T187A 突变体进行的分子动力学模拟表明,这些突变导致单体内和单体间氢键网络的重大重排。总之,我们的研究表明,扰乱氢键簇的特定点突变会导致 hAQP1 严重折叠错误并破坏其寡聚化。这些数据为了解人类水通道蛋白-1的结构稳定性提供了宝贵的信息,并对水通道蛋白家族的其他成员产生了影响,因为这些网络在人类和非哺乳动物的各种水通道蛋白同源物中基本上是保守的。
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A conserved H-bond network in human aquaporin-1 is necessary for native folding and oligomerization.
Aquaporins (AQPs) are α-helical transmembrane proteins that conduct water through membranes with high selectivity and permeability. For human AQP1, in addition to the functional Asn-Pro-Ala motifs and the aromatic/Arg selectivity filter within the pore, there are several highly conserved residues that form an expansive hydrogen-bonding network. Prior solid-state nuclear magnetic resonance studies and structural conservation analysis have detailed which residues may be involved in this network. We explored this network by mutating the sidechains or backbones involved in hydrogen-bonding, generating the following mutants: N127A, V133P, E142A, T187A, R195A, S196A. The fold and stability of these mutants were assessed with attenuated total reflection Fourier transform infra-red spectroscopy coupled with hydrogen/deuterium exchange upon increasing temperature. We found that replacement of any of the chosen residues to alanine leads to either partial instability or outright misfolding at room temperature, with the latter being most pronounced for the N127A, V133P, T187A, and R195A mutants. Deconvolution analysis of the amide I band revealed considerable secondary structure deviations, with some mutants exhibiting new random coil and β-sheet structures. We also found that some of these mutations potentially disrupt the oligomerization of human AQP1. BN-PAGE and DLS data provides evidence towards the loss of tetramers within most of the mutants, meanwhile only the S196A mutant retains tetrameric organization. The molecular dynamics simulation of the wild-type, and the N127A, E142A, and T187A mutants show that these mutations result in major rearrangements of intra- and inter-monomer hydrogen-bond networks. Overall, we show that specific point mutations that perturb hydrogen-bonding clusters result in severe misfolding in hAQP1 and disruption of its oligomerization. This data provides valuable insight into the structural stability of human aquaporin-1 and has implications towards other members of the AQP family, as these networks are largely conserved among a variety of human and non-mammalian AQP homologs.
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来源期刊
Biophysical journal
Biophysical journal 生物-生物物理
CiteScore
6.10
自引率
5.90%
发文量
3090
审稿时长
2 months
期刊介绍: BJ publishes original articles, letters, and perspectives on important problems in modern biophysics. The papers should be written so as to be of interest to a broad community of biophysicists. BJ welcomes experimental studies that employ quantitative physical approaches for the study of biological systems, including or spanning scales from molecule to whole organism. Experimental studies of a purely descriptive or phenomenological nature, with no theoretical or mechanistic underpinning, are not appropriate for publication in BJ. Theoretical studies should offer new insights into the understanding ofexperimental results or suggest new experimentally testable hypotheses. Articles reporting significant methodological or technological advances, which have potential to open new areas of biophysical investigation, are also suitable for publication in BJ. Papers describing improvements in accuracy or speed of existing methods or extra detail within methods described previously are not suitable for BJ.
期刊最新文献
Laplace Approximation of J-factors for rigid base and rigid base pair models of DNA cyclization. Interacting myosin head dynamics and their modification by 2'-deoxy-ADP. A conserved H-bond network in human aquaporin-1 is necessary for native folding and oligomerization. A computational model for lipid-anchored polysaccharide export by the outer membrane protein GfcD. Estimation of vibrational spectra of Trp-cage protein from nonequilibrium metadynamics simulations.
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