5S rDNA、45S rDNA 和 (TTTAGGG)3 寡核苷酸位置的荧光原位杂交分析。

IF 1.7 4区 生物学 Q4 CELL BIOLOGY Cytogenetic and Genome Research Pub Date : 2024-10-12 DOI:10.1159/000541706
Hongyou Zhao, Duo Wang, Haitao Li, Shuang Li, Yanfang Wang, Anshun Xu, Chunyong Yang, Ge Li, Yanqian Wang, Lixia Zhang
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引用次数: 0

摘要

简介Gloriosa superba L.是一种原产于非洲的重要园艺和药用植物。然而,对该物种进行的少数细胞遗传学研究主要集中在染色体计数和基于染色体形态的核型分析上。荧光原位杂交(FISH)是检测染色体特定区域中 DNA 重复元素的有力工具。方法:本文使用 5S 和 45S rDNA 以及端粒重复 (TTTAGGG)3 寡核苷酸,通过荧光原位杂交构建了 G. superba 的详细核型:观察到 22 条染色体。在一对染色体短臂的近端区域检测到两个 5S rDNA 杂交信号,与 (TTTAGGG)3 末端信号相邻。在四条染色体短臂的中心粒区域附近检测到四个 45S rDNA 信号,但其中一个信号非常弱,与其他信号相比几乎检测不到。端粒重复杂交信号分布在每条染色体的末端区域。显示的染色体完好无损,染色体数目准确。染色体长度范围为 3.46 至 9.31 μm。这些结果将有助于绘制其他主要重复序列的细胞遗传图谱,从而加深对超霸龙基因组结构和进化历史的了解。
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Fluorescence in situ hybridization analysis of Oligonucleotide 5S rDNA, 45S rDNA, and (TTTAGGG)3 locations in Gloriosa superba L.

Introduction: Gloriosa superba L. is a horticulturally and medicinally important plant native to Africa. However, the few cytogenetic studies of the species are mainly focused on chromosome counting and chromosome morphology-based karyotyping. Fluorescence in situ hybridization (FISH) is a powerful tool for the detection of DNA repetitive elements in a specific region of a chromosome.

Methods: Here, detailed karyotypes of G. superba were constructed by FISH using 5S and 45S rDNAs, and telomeric repeat (TTTAGGG)3 oligonucleotides.

Results and conclusion: Twenty-two chromosomes were observed. Two 5S rDNA hybridization signals were detected in the proximal regions of the short arms of one pair of chromosomes, which were adjacent to the (TTTAGGG)3 terminal signals. Four 45S rDNA signals were detected near the centromere region of the short arm of the four chromosomes, but one of these was very weak and almost undetectable compared to the others. Telomeric repeat hybridization signals were distributed at the terminal region of each chromosome. The chromosomes displayed were intact and the chromosome counts were accurate. Chromosome length ranged from 3.46 to 9.31 μm. These results will facilitate the cytogenetic mapping of other major repeats, thus contributing to an improved understanding of the G. superba genome structure and evolutionary history.

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来源期刊
Cytogenetic and Genome Research
Cytogenetic and Genome Research 生物-细胞生物学
CiteScore
3.10
自引率
5.90%
发文量
25
审稿时长
1 months
期刊介绍: During the last decades, ''Cytogenetic and Genome Research'' has been the leading forum for original reports and reviews in human and animal cytogenetics, including molecular, clinical and comparative cytogenetics. In recent years, most of its papers have centered on genome research, including gene cloning and sequencing, gene mapping, gene regulation and expression, cancer genetics, comparative genetics, gene linkage and related areas. The journal also publishes key papers on chromosome aberrations in somatic, meiotic and malignant cells. Its scope has expanded to include studies on invertebrate and plant cytogenetics and genomics. Also featured are the vast majority of the reports of the International Workshops on Human Chromosome Mapping, the reports of international human and animal chromosome nomenclature committees, and proceedings of the American and European cytogenetic conferences and other events. In addition to regular issues, the journal has been publishing since 2002 a series of topical issues on a broad variety of themes from cytogenetic and genome research.
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Association of leukocyte telomere length and the risk of disease severity and metabolic comorbidities in Arab patients with psoriasis. Delineating the W sex chromosome in the clam shrimp, Eulimnadia texana. Karyotypes and chromosomal mapping of some repetitive DNAs in two stingless bee species (Apidae: Meliponini), with the description of a B chromosome in Plebeia genus. Analysis of chromosome test results of 24,175 miscarried fetuses in Japan from 2000 to 2021. Fluorescence in situ hybridization analysis of Oligonucleotide 5S rDNA, 45S rDNA, and (TTTAGGG)3 locations in Gloriosa superba L.
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