心力衰竭和乳腺癌潜在靶点的遗传推断和单细胞表达分析。

IF 2.7 3区 医学 Q3 ONCOLOGY Journal of Cancer Research and Clinical Oncology Pub Date : 2024-10-26 DOI:10.1007/s00432-024-06010-y
Yue Li, Ying Huang, Ning An, Xiaomiao Guan, Bing Liu, Huiying Li, Tingting Jiang
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引用次数: 0

摘要

背景:乳腺癌和心力衰竭是全球主要的公共卫生问题,具有显著的遗传异质性和复杂的分子机制。本研究旨在通过结合遗传推断和单细胞表达分析,探索心力衰竭和乳腺癌的潜在遗传靶点,并利用孟德尔随机方法评估这些靶点的因果关系:我们首先利用全基因组关联研究(GWAS)数据确定了与心衰和乳腺癌相关的基因变异。随后,我们通过单细胞 RNA 测序技术分析了这些遗传变异在不同细胞类型中的表达模式。此外,我们还利用体外实验,使用免疫荧光技术评估了 ITM2B 对 MCF7 的影响:结果:我们的研究发现了与心力衰竭和乳腺癌相关的多种基因变异,这些变异在心脏和乳腺细胞中呈现出特定的表达模式。ITM2B 基因在乳腺癌中高度表达。ITM2B 在 T 细胞中的表达量最高,而在增殖细胞中的表达量最低。沉默 ITM2B 基因可促进 MCF7 乳腺癌细胞的凋亡并抑制其增殖和迁移:通过整合遗传推断和单细胞表达分析,本研究揭示了心力衰竭和乳腺癌的潜在遗传靶点,并利用孟德尔随机化方法验证了这些靶点的因果效应。
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Genetic inference and single cell expression analysis of potential targets in heart failure and breast cancer.

Background: Breast cancer and heart failure are major public health issues globally, characterized by significant genetic heterogeneity and complex molecular mechanisms. This study aims to explore potential genetic targets in heart failure and breast cancer through combining genetic inference and single-cell expression analysis, and to assess the causal relationships of these targets using Mendelian randomization methods.

Methods: We first identified genetic variants associated with heart failure and breast cancer using genome-wide association study (GWAS) data. Subsequently, we analyzed the expression patterns of these genetic variants in different cell types through single-cell RNA sequencing technology. Furthermore, we utilized in vitro experiment to assess the effects of ITM2B on MCF7 using immunofluorescence.

Results: Our study identified multiple genetic variants associated with heart failure and breast cancer, showing specific expression patterns in heart and breast cells. The ITM2B gene is highly expressed in breast cancer. ITM2B shows the highest expression in T cells and the lowest expression in proliferating cells. Silencing the ITM2B gene can promote apoptosis and inhibit proliferation and migration of MCF7 breast cancer cells.

Conclusion: By integrating genetic inference and single-cell expression analysis, this study revealed potential genetic targets in heart failure and breast cancer, and validated the causal effects of these targets using Mendelian randomization methods.

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来源期刊
CiteScore
4.00
自引率
2.80%
发文量
577
审稿时长
2 months
期刊介绍: The "Journal of Cancer Research and Clinical Oncology" publishes significant and up-to-date articles within the fields of experimental and clinical oncology. The journal, which is chiefly devoted to Original papers, also includes Reviews as well as Editorials and Guest editorials on current, controversial topics. The section Letters to the editors provides a forum for a rapid exchange of comments and information concerning previously published papers and topics of current interest. Meeting reports provide current information on the latest results presented at important congresses. The following fields are covered: carcinogenesis - etiology, mechanisms; molecular biology; recent developments in tumor therapy; general diagnosis; laboratory diagnosis; diagnostic and experimental pathology; oncologic surgery; and epidemiology.
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