深入了解人类端粒研究方法的长度和广度。

IF 9.5 2区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Biomarker Research Pub Date : 2024-10-22 DOI:10.1186/s40364-024-00668-9
Tiernan Coulter, Claire Hill, Amy Jayne McKnight
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引用次数: 0

摘要

端粒是真核染色体末端的保护性结构,与衰老和健康状况密切相关。端粒在细胞的每个生殖周期中都会发生损耗。有证据表明,端粒过短会引发 DNA 损伤反应,导致细胞衰老。要全面研究端粒缩短在疾病和人类衰老生物学中的作用,就需要精确的端粒测量方法。在过去的二十年中,出现了多种用于测量端粒的技术。这篇社论强调了传统和新兴技术的优势和局限性,指导研究人员选择最适合其研究需要的方法。这些方法包括定量聚合酶链式反应(qPCR)、Ω qPCR(Ω-qPCR)、末端限制性片段分析(TRF)、单端粒绝对长度快速测定(STAR)、单端粒长度分析(STELA)、端粒最短长度测定(TESLA)、端粒梳理测定(TCA)和长读端粒测序。面临的挑战包括在队列内和队列间复制端粒测量、测量单个染色体上的端粒长度以及为出版物提供标准化报告。会议强调了当前和未来的重点领域,最近在方法上取得的进展,如长读程测序,为在单个染色体水平上研究端粒提供了重要空间。
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Insights into the length and breadth of methodologies harnessed to study human telomeres.

Telomeres are protective structures at the end of eukaryotic chromosomes that are strongly implicated in ageing and ill health. They attrition upon every cellular reproductive cycle. Evidence suggests that short telomeres trigger DNA damage responses that lead to cellular senescence. Accurate methods for measuring telomeres are required to fully investigate the roles that shortening telomeres play in the biology of disease and human ageing. The last two decades have brought forth several techniques that are used for measuring telomeres. This editorial highlights strengths and limitations of traditional and emerging techniques, guiding researchers to choose the most appropriate methodology for their research needs. These methods include Quantitative Polymerase Chain Reaction (qPCR), Omega qPCR (Ω-qPCR), Terminal Restriction Fragment analysis (TRF), Single Telomere Absolute-length Rapid (STAR) assays, Single TElomere Length Analysis (STELA), TElomere Shortest Length Assays (TESLA), Telomere Combing Assays (TCA), and Long-Read Telomere Sequencing. Challenges include replicating telomere measurement within and across cohorts, measuring the length of telomeres on individual chromosomes, and standardised reporting for publications. Areas of current and future focus have been highlighted, with recent methodical advancements, such as long-read sequencing, providing significant scope to study telomeres at an individual chromosome level.

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来源期刊
Biomarker Research
Biomarker Research Biochemistry, Genetics and Molecular Biology-Molecular Medicine
CiteScore
15.80
自引率
1.80%
发文量
80
审稿时长
10 weeks
期刊介绍: Biomarker Research, an open-access, peer-reviewed journal, covers all aspects of biomarker investigation. It seeks to publish original discoveries, novel concepts, commentaries, and reviews across various biomedical disciplines. The field of biomarker research has progressed significantly with the rise of personalized medicine and individual health. Biomarkers play a crucial role in drug discovery and development, as well as in disease diagnosis, treatment, prognosis, and prevention, particularly in the genome era.
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