基于 pIJ101 的链霉菌-大肠杆菌穿梭载体的完整序列。

Access microbiology Pub Date : 2024-10-23 eCollection Date: 2024-01-01 DOI:10.1099/acmi.0.000893.v3
Katelyn V Brown, S Eric Nybo
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引用次数: 0

摘要

高拷贝数质粒是原核生物基因过表达研究不可或缺的工具,可用于设计途径或探究感兴趣的表型。鉴于放线菌在生产角质溶解酶和具有生物活性的天然产品方面的作用,为与工业相关的放线菌开发遗传工具具有特殊意义。在放线菌中,基于 SCP2* 和 pIJ101 不相容组的链霉菌-大肠杆菌穿梭载体被广泛用于分子克隆和基因表达研究。本文利用新一代测序技术测定了两种常用的基于 pIJ101 的链霉菌-大肠杆菌穿梭载体 pEM4 和 pUWL201 的序列。发现 pEM4 长 8.3 kbp,含有一个 β-内酰胺酶基因、硫链霉素抗性标记、lacZɑ 片段、ColE1 复制源和链霉菌 pIJ101 复制源。pUWL201 长 6.78 kbp,含有一个 β-内酰胺酶基因、硫链霉素抗性标记、lacZɑ 片段、ColE1 复制源和链霉菌 pIJ101 复制源。有趣的是,pEM4 和 pUWL201 的序列分别比之前报道的大小超出了 1.1 和 0.4 kbp。本报告用这些穿梭载体的校正序列更新了文献,确保了它们与现代合成生物学克隆方法的兼容性。
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Complete sequences of pIJ101-based Streptomyces-Escherichia coli shuttle vectors.

High-copy-number plasmids are indispensable tools for gene overexpression studies in prokaryotes to engineer pathways or probe phenotypes of interest. The development of genetic tools for the industrially relevant Actinobacteria is of special interest, given their utility in producing keratolytic enzymes and biologically active natural products. Within the Actinobacteria, Streptomyces-Escherichia coli shuttle vectors based on the SCP2* and pIJ101 incompatibility groups are widely employed for molecular cloning and gene expression studies. Here, the sequences of two commonly used pIJ101-based Streptomyces-E. coli shuttle vectors, pEM4 and pUWL201, were determined using next-generation sequencing. These plasmids drive the expression of heterologous genes using the constitutive ermE*p promoter. pEM4 was found to be 8.3 kbp long, containing a β-lactamase gene, thiostrepton resistance marker, the lacZɑ fragment, a ColE1 origin of replication and the Streptomyces pIJ101 origin of replication. pUWL201 was found to be 6.78 kbp long, containing a β-lactamase gene, thiostrepton resistance marker, the lacZɑ fragment, a ColE1 origin of replication and the Streptomyces pIJ101 origin of replication. Interestingly, the sequences for both pEM4 and pUWL201 exceed their previously reported size by 1.1 and 0.4 kbp, respectively. This report updates the literature with the corrected sequences for these shuttle vectors, ensuring their compatibility with modern synthetic biology cloning methodologies.

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