肾细胞癌组织病理学自动分级的核聚焦策略

IF 6.7 2区 医学 Q1 COMPUTER SCIENCE, INFORMATION SYSTEMS IEEE Journal of Biomedical and Health Informatics Pub Date : 2024-10-28 DOI:10.1109/JBHI.2024.3487004
Hyunjun Cho, Dongjin Shin, Kwang-Hyun Uhm, Sung-Jea Ko, Yosep Chong, Seung-Won Jung
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引用次数: 0

摘要

肾癌发病率的上升凸显了对精确、可重复诊断方法的需求。特别是肾细胞癌(RCC)这种最常见的肾癌类型,需要准确的核分级以更好地预测预后。深度学习的最新进展促进了利用组织病理学图像中的上下文特征进行端到端诊断的方法。然而,大多数现有方法仅关注图像级特征,或缺乏有效的核分级预测结果汇总流程,从而限制了其诊断准确性。在本文中,我们介绍了一个新颖的框架--细胞核特征辅助斑块级 RCC 分级(NuAP-RCC),该框架利用细胞核级特征来增强斑块级 RCC 分级。我们的方法利用核级 RCC 分级网络提取等级感知特征,这些特征作为图中的节点特征。这些节点特征通过图神经网络进行聚合,以捕捉细胞核的形态特征和分布。然后将聚合特征与卷积神经网络提取的全局图像级特征相结合,最终形成准确的 RCC 分级特征。此外,我们还提出了一个用于斑块级 RCC 分级的新数据集。实验结果表明,NuAP-RCC 在不同医疗机构的数据集上都具有卓越的准确性和通用性,在 USM-RCC 数据集上,其准确性比排名第二的模型提高了 6.15%。
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A Nuclei-Focused Strategy for Automated Histopathology Grading of Renal Cell Carcinoma.

The rising incidence of kidney cancer underscores the need for precise and reproducible diagnostic methods. In particular, renal cell carcinoma (RCC), the most prevalent type of kidney cancer, requires accurate nuclear grading for better prognostic prediction. Recent advances in deep learning have facilitated end-to-end diagnostic methods using contextual features in histopathological images. However, most existing methods focus only on image-level features or lack an effective process for aggregating nuclei prediction results, limiting their diagnostic accuracy. In this paper, we introduce a novel framework, Nuclei feature Assisted Patch-level RCC grading (NuAP-RCC), that leverages nuclei-level features for enhanced patch-level RCC grading. Our approach employs a nuclei-level RCC grading network to extract grade-aware features, which serve as node features in a graph. These node features are aggregated using graph neural networks to capture the morphological characteristics and distributions of the nuclei. The aggregated features are then combined with global image-level features extracted by convolutional neural networks, resulting in a final feature for accurate RCC grading. In addition, we present a new dataset for patch-level RCC grading. Experimental results demonstrate the superior accuracy and generalizability of NuAP-RCC across datasets from different medical institutions, achieving a 6.15% improvement in accuracy over the second-best model on the USM-RCC dataset.

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来源期刊
IEEE Journal of Biomedical and Health Informatics
IEEE Journal of Biomedical and Health Informatics COMPUTER SCIENCE, INFORMATION SYSTEMS-COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS
CiteScore
13.60
自引率
6.50%
发文量
1151
期刊介绍: IEEE Journal of Biomedical and Health Informatics publishes original papers presenting recent advances where information and communication technologies intersect with health, healthcare, life sciences, and biomedicine. Topics include acquisition, transmission, storage, retrieval, management, and analysis of biomedical and health information. The journal covers applications of information technologies in healthcare, patient monitoring, preventive care, early disease diagnosis, therapy discovery, and personalized treatment protocols. It explores electronic medical and health records, clinical information systems, decision support systems, medical and biological imaging informatics, wearable systems, body area/sensor networks, and more. Integration-related topics like interoperability, evidence-based medicine, and secure patient data are also addressed.
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