[口腔鳞状细胞癌免疫预后风险模型的构建与验证]。

Q4 Medicine 上海口腔医学 Pub Date : 2024-08-01
Jiao Zhao, Bai-Yan Sui, Xin Liu, Min Ruan
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引用次数: 0

摘要

目的:分析口腔鳞状细胞癌(OSCC)中差异表达的免疫相关核心基因,并构建OSCC患者免疫相关预后风险模型:对癌症基因组图谱(TCGA)数据库中OSCC患者的RNA测序数据进行加权基因共表达网络分析,以确定免疫相关模块和核心基因。通过单变量考克斯回归分析和生存分析筛选出与免疫预后相关的核心基因,从而构建出与免疫相关的OSCC预后风险模型。预后风险模型的预测能力通过卡普兰-梅耶分析、接收者操作特征曲线和来自 GSE41613 的外部数据集进行了评估。通过实时定量 PCR 检测(RT-qPCR)了 OSCC 患者肿瘤样本中 8 个免疫预后核心基因的表达情况,并通过计算 OSCC 患者的风险评分评估了风险评分与侵袭深度之间的相关性。统计分析采用SPSS 21.0软件包:结果:基于8个免疫预后核心基因(CSF2RA、CLEC4C、COL5A3、CTSG、EDNRA、GPC4、GUCY1A2、ANGPT2)成功构建了OSCC预后风险模型。预后风险模型通过卡普兰-梅耶分析、接收者操作特征曲线和 GSE41613 数据集验证了其完美的预测价值。根据该模型计算出的OSCC患者风险评分与侵袭深度呈正相关,表明该模型具有预测OSCC潜在风险的能力:结论:根据8个免疫预后核心基因的特征构建了OSCC预后风险模型,可有效预测OSCC患者的预后,为OSCC的免疫预防提供了重要参考。
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[Construction and validation of an immune prognostic risk model in oral squamous cell carcinoma].

Purpose: To analyze the immune-related core genes differentially expressed in oral squamous cell carcinoma(OSCC) and construct an immune-related prognostic risk model for OSCC patients.

Methods: Weighted gene co-expression network analysis of RNA sequencing data from OSCC patients in the Cancer Genome Atlas (TCGA) database was conducted to identify immune-related modules and core genes. Core genes associated with immune prognosis were screened using univariate Cox regression analysis and survival analysis to construct an immune-related prognostic risk model for OSCC. The prognostic risk model's predictive ability was evaluated using Kaplan-Meier analysis, receiver operating characteristic curves, and external datasets from GSE41613. The expression of 8 immune prognostic core genes in tumor samples from OSCC patients was detected by real-time quantitative PCR assay(RT-qPCR), and the correlation between risk score and depth of invasion was assessed by calculating risk scores for OSCC patients. Statistical analysis was performed with SPSS 21.0 software package.

Results: Prognostic risk model for OSCC was successfully constructed based on 8 immune prognostic core genes(CSF2RA, CLEC4C, COL5A3, CTSG, EDNRA, GPC4, GUCY1A2, ANGPT2). The prognostic risk model demonstrated perfect predictive value validated using Kaplan-Meier analysis, receiver operating characteristic curve, and the GSE41613 dataset. The risk scores of OSCC patients calculated based on this model were positively correlated with the depth of invasion, indicating that the model have the ability to predict the potential risk of OSCC.

Conclusions: An OSCC prognostic risk model is constructed based on the signatures of 8 immune prognostic core genes, which may effectively predict the prognosis of OSCC patients, providing an important reference for immune prevention of OSCC.

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来源期刊
上海口腔医学
上海口腔医学 Medicine-Medicine (all)
CiteScore
0.30
自引率
0.00%
发文量
5299
期刊介绍: "Shanghai Journal of Stomatology (SJS)" is a comprehensive academic journal of stomatology directed by Shanghai Jiao Tong University and sponsored by the Ninth People's Hospital Affiliated to Shanghai Jiao Tong University School of Medicine. The main columns include basic research, clinical research, column articles, clinical summaries, reviews, academic lectures, etc., which are suitable for reference by clinicians, scientific researchers and teaching personnel at all levels engaged in oral medicine.
期刊最新文献
[Application of PDCA theory in prosthodontic for standardized training of dental residents]. [Benign deep lobe parotid tumors: classification in association with localization and surgical approaches]. [Changes of soft tissue profile of maxillary edentulous patients with immediate denture]. [Construction and validation of an immune prognostic risk model in oral squamous cell carcinoma]. [Correlations of salivary ion concentration, Streptococcus and Bifidobacterium in children with caries].
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