了解温带森林土壤中四cladium 物种的生态多样性。

IF 4.3 2区 生物学 Q2 MICROBIOLOGY Environmental microbiology Pub Date : 2024-11-04 DOI:10.1111/1462-2920.70001
Anna Lazar, Richard P. Phillips, Stephanie Kivlin, Gary D. Bending, Ryan M. Mushinski
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引用次数: 0

摘要

尽管传统上人们一直将四碳鳞霉菌作为水生噬菌体进行研究,但越来越多的元基因组学和代谢编码报告发现土壤环境中存在四碳鳞霉菌,这就提出了有关其生态适应性和多功能性的重要问题。我们研究了与温带森林土壤中四cladium 的相对丰度、多样性和生态动态相关的因素。通过对从美国东部六个森林地点的 54 个林地采集的土壤样本进行扩增子测序,我们发现了 29 个不同的扩增子序列变体(ASV)代表四碳鳞茎,不同地点之间的相对丰度差异很大,ASV 群落组成变化很小。四碳鳞茎的丰富度与土壤pH值、土壤温度、全硫和淤泥含量呈正相关,而与植物枯落物的质量(如木质素与氮的比率和木质纤维素指数)呈负相关。共生网络分析表明,四孢鳞霉与其他丰富的真菌群(包括外生菌根真菌和丛枝菌根真菌)之间存在负相关关系。总之,我们的研究结果凸显了Tetracladium在温带森林土壤中的生态意义,并强调了特定地点因素和微生物相互作用在形成其分布模式和生态动态方面的重要性。
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Understanding the ecological versatility of Tetracladium species in temperate forest soils

Although Tetracladium species have traditionally been studied as aquatic saprotrophs, the growing number of metagenomic and metabarcoding reports detecting them in soil environments raises important questions about their ecological adaptability and versatility. We investigated the factors associated with the relative abundance, diversity and ecological dynamics of Tetracladium in temperate forest soils. Through amplicon sequencing of soil samples collected from 54 stands in six forest sites across the eastern United States, we identified 29 distinct Amplicon Sequence Variants (ASVs) representing Tetracladium, with large differences in relative abundance and small changes in ASV community composition among sites. Tetracladium richness was positively related to soil pH, soil temperature, total sulphur and silt content, and negatively related to plant litter quality, such as the lignin-to-nitrogen ratio and the lignocellulose index. Co-occurrence network analysis indicated negative relationships between Tetracladium and other abundant fungal groups, including ectomycorrhizal and arbuscular mycorrhizal fungi. Collectively, our findings highlight the ecological significance of Tetracladium in temperate forest soils and emphasize the importance of site-specific factors and microbial interactions in shaping their distribution patterns and ecological dynamics.

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来源期刊
Environmental microbiology
Environmental microbiology 环境科学-微生物学
CiteScore
9.90
自引率
3.90%
发文量
427
审稿时长
2.3 months
期刊介绍: Environmental Microbiology provides a high profile vehicle for publication of the most innovative, original and rigorous research in the field. The scope of the Journal encompasses the diversity of current research on microbial processes in the environment, microbial communities, interactions and evolution and includes, but is not limited to, the following: the structure, activities and communal behaviour of microbial communities microbial community genetics and evolutionary processes microbial symbioses, microbial interactions and interactions with plants, animals and abiotic factors microbes in the tree of life, microbial diversification and evolution population biology and clonal structure microbial metabolic and structural diversity microbial physiology, growth and survival microbes and surfaces, adhesion and biofouling responses to environmental signals and stress factors modelling and theory development pollution microbiology extremophiles and life in extreme and unusual little-explored habitats element cycles and biogeochemical processes, primary and secondary production microbes in a changing world, microbially-influenced global changes evolution and diversity of archaeal and bacterial viruses new technological developments in microbial ecology and evolution, in particular for the study of activities of microbial communities, non-culturable microorganisms and emerging pathogens
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