翻译 OCTA 中视网膜特征的定量表征。

IF 2.8 4区 医学 Q2 MEDICINE, RESEARCH & EXPERIMENTAL Experimental Biology and Medicine Pub Date : 2024-10-23 eCollection Date: 2024-01-01 DOI:10.3389/ebm.2024.10333
Rashadul Hasan Badhon, Atalie Carina Thompson, Jennifer I Lim, Theodore Leng, Minhaj Nur Alam
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引用次数: 0

摘要

本研究探讨了利用生成式机器学习(ML)从 OCT 翻译出定量光学相干断层扫描血管造影(OCTA)特征的可行性,以确定视网膜血管变化的特征。生成式对抗网络框架与二维血管分割和二维 OCTA 图像转换模型一起使用,在 OCT-500 公共数据集上进行训练,并通过伊利诺伊大学芝加哥分校(UIC)视网膜诊所的数据进行验证。数据集按扫描范围(视场)和疾病状态分类。验证涉及质量和定量指标,将翻译后的 OCTA(TR-OCTA)与地面真实 OCTA(GT-OCTA)进行比较,以评估客观疾病诊断的可行性。在我们的研究中,TR-OCTA 在 3 毫米和 6 毫米数据集中均显示出较高的图像质量(高分辨率和对比度质量,与 GT-OCTA 相比结构相似度适中)。与受局部血管扭曲影响的密度特征相比,迂曲度和血管周长指数等血管特征表现出更一致的趋势。对于验证数据集(UIC),由于在 UIC 数据上进行了盲法模型训练以评估推理性能,因此这些指标显示出类似的趋势,但性能略有下降。总之,这项研究提出了一个很有前景的解决方案,即利用 TR-OCTA 的血管特征进行疾病检测,从而解决临床实践中采用 OCTA 的局限性。通过让更多人能够获得详细的血管成像,减少对昂贵的 OCTA 设备的依赖,这项研究有望显著提高视网膜疾病的诊断过程。
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Quantitative characterization of retinal features in translated OCTA.

This study explores the feasibility of quantitative Optical Coherence Tomography Angiography (OCTA) features translated from OCT using generative machine learning (ML) for characterizing vascular changes in retina. A generative adversarial network framework was employed alongside a 2D vascular segmentation and a 2D OCTA image translation model, trained on the OCT-500 public dataset and validated with data from the University of Illinois at Chicago (UIC) retina clinic. Datasets are categorized by scanning range (Field of view) and disease status. Validation involved quality and quantitative metrics, comparing translated OCTA (TR-OCTA) with ground truth OCTAs (GT-OCTA) to assess the feasibility for objective disease diagnosis. In our study, TR-OCTAs showed high image quality in both 3 and 6 mm datasets (high-resolution and contrast quality, moderate structural similarity compared to GT-OCTAs). Vascular features like tortuosity and vessel perimeter index exhibits more consistent trends compared to density features which are affected by local vascular distortions. For the validation dataset (UIC), the metrics show similar trend with a slightly decreased performance since the model training was blind on UIC data, to evaluate inference performance. Overall, this study presents a promising solution to the limitations of OCTA adoption in clinical practice by using vascular features from TR-OCTA for disease detection. By making detailed vascular imaging more widely accessible and reducing reliance on expensive OCTA equipment, this research has the potential to significantly enhance the diagnostic process for retinal diseases.

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来源期刊
Experimental Biology and Medicine
Experimental Biology and Medicine 医学-医学:研究与实验
CiteScore
6.00
自引率
0.00%
发文量
157
审稿时长
1 months
期刊介绍: Experimental Biology and Medicine (EBM) is a global, peer-reviewed journal dedicated to the publication of multidisciplinary and interdisciplinary research in the biomedical sciences. EBM provides both research and review articles as well as meeting symposia and brief communications. Articles in EBM represent cutting edge research at the overlapping junctions of the biological, physical and engineering sciences that impact upon the health and welfare of the world''s population. Topics covered in EBM include: Anatomy/Pathology; Biochemistry and Molecular Biology; Bioimaging; Biomedical Engineering; Bionanoscience; Cell and Developmental Biology; Endocrinology and Nutrition; Environmental Health/Biomarkers/Precision Medicine; Genomics, Proteomics, and Bioinformatics; Immunology/Microbiology/Virology; Mechanisms of Aging; Neuroscience; Pharmacology and Toxicology; Physiology; Stem Cell Biology; Structural Biology; Systems Biology and Microphysiological Systems; and Translational Research.
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