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Collagen II enrichment through scAAV6-RNAi-mediated inhibition of matrix-metalloproteinases 3 and 13 in degenerative nucleus-pulposus cells degenerative disc disease and biological treatment strategies. 通过scAAV6-RNAi介导的基质金属蛋白酶3和13抑制退化性髓核细胞中胶原蛋白II的富集退化性椎间盘疾病及生物治疗策略。
IF 3.2 4区 医学 Q2 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-09-02 DOI: 10.3389/ebm.2024.10048
Demissew Shenegelegn Mern,Claudius Thomé
Intervertebral disc (IVD) degeneration damaging the extracellular matrix (ECM) of IVDs is the main cause of spine-associated disorders. Degenerative disc disease (DDD) is a multifaceted disorder, where environmental factors, inflammatory cytokines and catabolic enzymes act together. DDD starts typically due to imbalance between ECM biosynthesis and degradation within IVDs, especially through unbalanced degradation of aggrecan and collagen II in nucleus pulposus (NP). Current treatment approaches are primarily based on conservative or surgical therapies, which are insufficient for biological regeneration. The disintegrins and metalloproteinases with thrombospondin motifs (ADAMTSs) and matrix metalloproteinases (MMPs) are the key proteolytic enzymes for degradation of aggrecan and collagens. Previously, high expression levels of ADAMTS4, ADAMTS5, MMP3 and MMP13, which are accompanied with low levels of aggrecan and collagen II, were demonstrated in degenerative human NP cells. Moreover, self-complementary adeno-associated virus type 6 (scAAV6) mediated inhibitions of ADAMTS4 and ADAMTS5 by RNA-interference (RNAi) could specifically enhance aggrecan level. Thus, MMPs are apparently the main degrading enzymes of collagen II in NP. Furthermore, scAAV6-mediated inhibitions of MMP3 and MMP13 have not yet been investigated. Therefore, we attempted to enhance the level of collagen II in degenerative NP cells by scAAV6-RNAi-mediated inhibitions of MMP3 and MMP13. MRI was used to determine preoperative grading of IVD degeneration in patients. After isolation and culturing of NP cells, cells were transduced with scAAV6-shRNAs targeting MMP3 or MMP13; and analysed by fluorescence microscopy, FACS, MTT assay, RT-qPCR, ELISA and western blotting. scAAV6-shRNRs have no impact on cell viability and proliferation, despite high transduction efficiencies (98.6%) and transduction units (1383 TU/Cell). Combined knockdown of MMP3 (92.8%) and MMP13 (90.9%) resulted in highest enhancement of collagen II (143.2%), whereby treatment effects were significant over 56 days (p < 0.001). Conclusively, scAAV6-RNAi-mediated inhibitions of MMP3 and MMP13 help to progress less immunogenic and enduring biological treatments in DDD.
损伤椎间盘细胞外基质(ECM)的椎间盘(IVD)退变是脊柱相关疾病的主要原因。椎间盘退行性病变(DDD)是一种多方面的疾病,环境因素、炎症细胞因子和分解酶共同起作用。椎间盘退行性病变的起因通常是椎间盘内 ECM 生物合成和降解失衡,尤其是髓核中 aggrecan 和胶原蛋白 II 的降解失衡。目前的治疗方法主要基于保守疗法或手术疗法,这些疗法不足以实现生物再生。具有血栓软骨素基序的崩解素和金属蛋白酶(ADAMTSs)以及基质金属蛋白酶(MMPs)是降解凝集素和胶原的关键蛋白水解酶。此前,在退行性人类 NP 细胞中,ADAMTS4、ADAMTS5、MMP3 和 MMP13 的表达水平较高,而阿格雷康和胶原蛋白 II 的表达水平较低。此外,自补体腺相关病毒 6 型(scAAV6)介导的 RNA 干扰(RNAi)抑制 ADAMTS4 和 ADAMTS5 可特异性提高凝集素水平。因此,MMPs 显然是 NP 中胶原蛋白 II 的主要降解酶。此外,scAAV6 介导的对 MMP3 和 MMP13 的抑制作用尚未得到研究。因此,我们尝试通过 scAAV6-RNAi- 介导的 MMP3 和 MMP13 抑制来提高变性 NP 细胞中胶原蛋白 II 的水平。核磁共振成像用于确定患者 IVD 退化的术前分级。在分离和培养 NP 细胞后,用靶向 MMP3 或 MMP13 的 scAAV6-shRNA 转导细胞,并通过荧光显微镜、FACS、MTT 检测、RT-qPCR、ELISA 和 Western 印迹法进行分析。联合敲除 MMP3(92.8%)和 MMP13(90.9%)可最大程度地增强胶原蛋白 II(143.2%),治疗效果在 56 天内显著(p < 0.001)。总之,scAAV6-RNAi 介导的 MMP3 和 MMP13 抑制有助于对 DDD 进行免疫原性较低且持久的生物治疗。
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引用次数: 0
Ultrasound-assisted laser therapy for selective removal of melanoma cells. 选择性清除黑色素瘤细胞的超声辅助激光疗法。
IF 2.8 4区 医学 Q2 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-08-07 eCollection Date: 2024-01-01 DOI: 10.3389/ebm.2024.10096
Madhumithra Subramanian Karthikesh, Noraida Martinez-Rivera, Eduardo Rosa-Molinar, Xueding Wang, Xinmai Yang

The current study explores the potential of ultrasound-assisted laser therapy (USaLT) to selectively destroy melanoma cells. The technology was tested on an ex vivo melanoma model, which was established by growing melanoma cells in chicken breast tissue. Ultrasound-only and laser-only treatments were used as control groups. USaLT was able to effectively destroy melanoma cells and selectively remove 66.41% of melanoma cells in the ex vivo tumor model when an ultrasound peak negative pressure of 2 MPa was concurrently applied with a laser fluence of 28 mJ/cm2 at 532 nm optical wavelength for 5 min. The therapeutic efficiency was further improved with the use of a higher laser fluence, and the treatment depth was improved to 3.5 mm with the use of 1,064 nm laser light at a fluence of 150 mJ/cm2. None of the laser-only and ultrasound-only treatments were able to remove any melanoma cells. The treatment outcome was validated with histological analyses and photoacoustic imaging. This study opens the possibility of USaLT for melanoma that is currently treated by laser therapy, but at a much lower laser fluence level, hence improving the safety potential of laser therapy.

本研究探讨了超声辅助激光疗法(USaLT)选择性摧毁黑色素瘤细胞的潜力。该技术在体内外黑色素瘤模型上进行了测试,该模型是通过在鸡乳腺组织中培育黑色素瘤细胞而建立的。对照组采用纯超声波治疗和纯激光治疗。当 2 兆帕的超声峰值负压与 532 nm 光波长、28 mJ/cm2 的激光能量同时作用 5 分钟时,USaLT 能够有效地破坏黑色素瘤细胞,并选择性地清除体内肿瘤模型中 66.41% 的黑色素瘤细胞。使用更高的激光通量可进一步提高治疗效率,使用 150 mJ/cm2 通量的 1,064 nm 激光可将治疗深度提高到 3.5 mm。纯激光治疗和纯超声波治疗都无法清除任何黑色素瘤细胞。组织学分析和光声成像验证了治疗效果。这项研究为目前使用激光治疗的黑色素瘤提供了使用 USaLT 治疗的可能性,但激光能量要低得多,从而提高了激光治疗的安全性。
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引用次数: 0
Modulation of arterial intima stiffness by disturbed blood flow. 血流紊乱对动脉内膜僵硬度的调节。
IF 2.8 4区 医学 Q2 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-07-31 eCollection Date: 2024-01-01 DOI: 10.3389/ebm.2024.10090
Briana C Bywaters, Andreea Trache, Gonzalo M Rivera

The intima, comprising the endothelium and the subendothelial matrix, plays a crucial role in atherosclerosis pathogenesis. The mechanical stress arising from disturbed blood flow (d-flow) and the stiffening of the arterial wall contributes to endothelial dysfunction. However, the specific impacts of these physical forces on the mechanical environment of the intima remain undetermined. Here, we investigated whether inhibiting collagen crosslinking could ameliorate the detrimental effects of persistent d-flow on the mechanical properties of the intima. Partial ligation of the left carotid artery (LCA) was performed in C57BL/6J mice, inducing d-flow. The right carotid artery (RCA) served as an internal control. Carotids were collected 2 days and 2 weeks after surgery to study acute and chronic effects of d-flow on the mechanical phenotype of the intima. The chronic effects of d-flow were decoupled from the ensuing arterial wall stiffening by administration of β-aminopropionitrile (BAPN), an inhibitor of collagen crosslinking by lysyl oxidase (LOX) enzymes. Atomic force microscopy (AFM) was used to determine stiffness of the endothelium and the denuded subendothelial matrix in en face carotid preparations. The stiffness of human aortic endothelial cells (HAEC) cultured on soft and stiff hydrogels was also determined. Acute exposure to d-flow caused a slight decrease in endothelial stiffness in male mice but had no effect on the stiffness of the subendothelial matrix in either sex. Regardless of sex, the intact endothelium was softer than the subendothelial matrix. In contrast, exposure to chronic d-flow led to a substantial increase in the endothelial and subendothelial stiffness in both sexes. The effects of chronic d-flow were largely prevented by concurrent BAPN administration. In addition, HAEC displayed reduced stiffness when cultured on soft vs. stiff hydrogels. We conclude that chronic d-flow results in marked stiffening of the arterial intima, which can be effectively prevented by inhibition of collagen crosslinking.

内膜由内皮和内皮下基质组成,在动脉粥样硬化的发病机制中起着至关重要的作用。血流紊乱(d-flow)和动脉壁僵化产生的机械应力会导致内皮功能障碍。然而,这些物理力对内膜机械环境的具体影响仍未确定。在此,我们研究了抑制胶原交联是否能改善持续二流动对内膜机械性能的有害影响。我们对 C57BL/6J 小鼠的左颈动脉(LCA)进行部分结扎,诱导 d-流。右颈动脉(RCA)作为内部对照。术后 2 天和 2 周采集颈动脉,研究 d-流动对内膜机械表型的急性和慢性影响。通过服用β-氨基丙腈(BAPN)(一种赖氨酰氧化酶(LOX)交联胶原的抑制剂),d-流动的慢性效应与随后的动脉壁僵化脱钩。原子力显微镜(AFM)用于测定颈动脉内皮和变性内皮下基质的硬度。此外,还测定了在软水凝胶和硬水凝胶上培养的人主动脉内皮细胞(HAEC)的硬度。雄性小鼠急性暴露于 d-流会导致内皮硬度轻微下降,但对男女小鼠内皮下基质的硬度均无影响。无论性别如何,完整的内皮都比内皮下基质柔软。与此相反,暴露于慢性 d-流动会导致雌雄内皮和内皮下基质的硬度大幅增加。同时服用 BAPN 可在很大程度上防止慢性 d-流动的影响。此外,在软水凝胶和硬水凝胶上培养 HAEC 时,其硬度也有所降低。我们的结论是,慢性直流会导致动脉内膜明显变硬,而抑制胶原交联可有效防止动脉内膜变硬。
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引用次数: 0
LM11A-31, a modulator of p75 neurotrophin receptor, suppresses HIV-1 replication and inflammatory response in macrophages LM11A-31 是 p75 神经营养素受体的调节剂,可抑制巨噬细胞中 HIV-1 的复制和炎症反应
IF 2.8 4区 医学 Q2 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-07-25 DOI: 10.3389/ebm.2024.10123
Golnoush Mirzahosseini, Namita Sinha, Lina Zhou, Sandip Godse, Sunitha Kodidela, Udai P. Singh, Tauheed Ishrat, Santosh Kumar
Antiretroviral drugs have made significant progress in treating HIV-1 and improving the quality of HIV-1-infected individuals. However, due to their limited permeability into the brain HIV-1 replication persists in brain reservoirs such as perivascular macrophages and microglia, which cause HIV-1-associated neurocognitive disorders. Therefore, it is highly desirable to find a novel therapy that can cross the blood-brain barrier (BBB) and target HIV-1 pathogenesis in brain reservoirs. A recently developed 2-amino-3-methylpentanoic acid [2-morpholin-4-yl-ethyl]-amide (LM11A-31), which is a p75 neutrotrophin receptor (p75NTR) modulator, can cross the BBB. In this study, we examined whether LM11A-31 treatment can suppress HIV-1 replication, oxidative stress, cytotoxicity, and inflammatory response in macrophages. Our results showed that LM11A-31 (100 nM) alone and/or in combination with positive control darunavir (5.5 µM) significantly suppresses viral replication and reduces cytotoxicity. Moreover, the HIV-1 suppression by LM11A-31 was comparable to the HIV-1 suppression by darunavir. Although p75NTR was upregulated in HIV-1-infected macrophages compared to uninfected macrophages, LM11A-31 did not significantly reduce the p75NTR expression in macrophages. Furthermore, our study illustrated that LM11A-31 alone and/or in combination with darunavir significantly suppress pro-inflammatory cytokines including IL-1β, IL-8, IL-18, and TNF-α and chemokines MCP-1 in HIV-induced macrophages. The suppression of these cytokines and chemokines by LM11A-31 was comparable to darunavir. In contrast, LM11A-31 did not significantly alter oxidative stress, expression of antioxidant enzymes, or autophagy marker proteins in U1 macrophages. The results suggest that LM11A-31, which can cross the BBB, has therapeutic potential in suppressing HIV-1 and inflammatory response in brain reservoirs, especially in macrophages.
抗逆转录病毒药物在治疗 HIV-1 和改善 HIV-1 感染者的质量方面取得了重大进展。然而,由于抗逆转录病毒药物在大脑中的渗透性有限,HIV-1 的复制持续存在于血管周围巨噬细胞和小胶质细胞等大脑储库中,从而导致 HIV-1 相关神经认知障碍。因此,寻找一种能穿过血脑屏障(BBB)、针对脑储库中 HIV-1 致病机制的新型疗法是非常理想的。最近开发的一种 2-氨基-3-甲基戊酸[2-吗啉-4-基-乙基]-酰胺(LM11A-31)是一种 p75 中性粒细胞受体(p75NTR)调节剂,可以穿过 BBB。在这项研究中,我们考察了 LM11A-31 是否能抑制巨噬细胞中 HIV-1 的复制、氧化应激、细胞毒性和炎症反应。我们的结果表明,LM11A-31(100 nM)单独使用和/或与阳性对照达芦那韦(5.5 µM)联合使用可显著抑制病毒复制并降低细胞毒性。此外,LM11A-31 对 HIV-1 的抑制作用与达鲁那韦对 HIV-1 的抑制作用相当。虽然与未感染的巨噬细胞相比,感染了 HIV-1 的巨噬细胞中 p75NTR 上调,但 LM11A-31 并未显著降低巨噬细胞中 p75NTR 的表达。此外,我们的研究还表明,LM11A-31 单独使用和/或与达鲁那韦联合使用可显著抑制 HIV 诱导的巨噬细胞中的促炎细胞因子,包括 IL-1β、IL-8、IL-18 和 TNF-α,以及趋化因子 MCP-1。LM11A-31 对这些细胞因子和趋化因子的抑制作用与达鲁那韦相当。相比之下,LM11A-31 并未显著改变 U1 巨噬细胞中的氧化应激、抗氧化酶的表达或自噬标记蛋白。结果表明,LM11A-31可以穿过BBB,在抑制HIV-1和脑储库中的炎症反应,尤其是巨噬细胞中的炎症反应方面具有治疗潜力。
{"title":"LM11A-31, a modulator of p75 neurotrophin receptor, suppresses HIV-1 replication and inflammatory response in macrophages","authors":"Golnoush Mirzahosseini, Namita Sinha, Lina Zhou, Sandip Godse, Sunitha Kodidela, Udai P. Singh, Tauheed Ishrat, Santosh Kumar","doi":"10.3389/ebm.2024.10123","DOIUrl":"https://doi.org/10.3389/ebm.2024.10123","url":null,"abstract":"Antiretroviral drugs have made significant progress in treating HIV-1 and improving the quality of HIV-1-infected individuals. However, due to their limited permeability into the brain HIV-1 replication persists in brain reservoirs such as perivascular macrophages and microglia, which cause HIV-1-associated neurocognitive disorders. Therefore, it is highly desirable to find a novel therapy that can cross the blood-brain barrier (BBB) and target HIV-1 pathogenesis in brain reservoirs. A recently developed 2-amino-3-methylpentanoic acid [2-morpholin-4-yl-ethyl]-amide (LM11A-31), which is a p75 neutrotrophin receptor (p75NTR) modulator, can cross the BBB. In this study, we examined whether LM11A-31 treatment can suppress HIV-1 replication, oxidative stress, cytotoxicity, and inflammatory response in macrophages. Our results showed that LM11A-31 (100 nM) alone and/or in combination with positive control darunavir (5.5 µM) significantly suppresses viral replication and reduces cytotoxicity. Moreover, the HIV-1 suppression by LM11A-31 was comparable to the HIV-1 suppression by darunavir. Although p75NTR was upregulated in HIV-1-infected macrophages compared to uninfected macrophages, LM11A-31 did not significantly reduce the p75NTR expression in macrophages. Furthermore, our study illustrated that LM11A-31 alone and/or in combination with darunavir significantly suppress pro-inflammatory cytokines including IL-1β, IL-8, IL-18, and TNF-α and chemokines MCP-1 in HIV-induced macrophages. The suppression of these cytokines and chemokines by LM11A-31 was comparable to darunavir. In contrast, LM11A-31 did not significantly alter oxidative stress, expression of antioxidant enzymes, or autophagy marker proteins in U1 macrophages. The results suggest that LM11A-31, which can cross the BBB, has therapeutic potential in suppressing HIV-1 and inflammatory response in brain reservoirs, especially in macrophages.","PeriodicalId":12163,"journal":{"name":"Experimental Biology and Medicine","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2024-07-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141805963","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The molecular mechanism responsible for HbSC retinopathy may depend on the action of the angiogenesis-related genes ROBO1 and SLC38A5 导致 HbSC 视网膜病变的分子机制可能取决于血管生成相关基因 ROBO1 和 SLC38A5 的作用
IF 2.8 4区 医学 Q2 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-07-24 DOI: 10.3389/ebm.2024.10070
S. M. da Silva Costa, M. T. Ito, Pedro Rodrigues Sousa da Cruz, B. B. de Souza, V. M. Rios, V. D. H. E. Bertozzo, Ana Carolina Lima Camargo, M. Viturino, C. Lanaro, D. M. de Albuquerque, Amanda M. do Canto, Sara Teresinha Olalla Saad, Stephanie Ospina-Prieto, M. Ozelo, F. F. Costa, M. B. de Melo
HbSC disease, a less severe form of sickle cell disease, affects the retina more frequently and patients have higher rates of proliferative retinopathy that can progress to vision loss. This study aimed to identify differences in the expression of endothelial cell-derived molecules associated with the pathophysiology of proliferative sickle cell retinopathy (PSCR). RNAseq was used to compare the gene expression profile of circulating endothelial colony-forming cells from patients with SC hemoglobinopathy and proliferative retinopathy (n = 5), versus SC patients without retinopathy (n = 3). Real-time polymerase chain reaction (qRT-PCR) was used to validate the RNAseq results. A total of 134 differentially expressed genes (DEGs) were found. DEGs were mainly associated with vasodilatation, type I interferon signaling, innate immunity and angiogenesis. Among the DEGs identified, we highlight the most up-regulated genes ROBO1 (log2FoldChange = 4.32, FDR = 1.35E-11) and SLC38A5 (log2FoldChange = 3.36 FDR = 1.59E-07). ROBO1, an axon-guided receptor, promotes endothelial cell migration and contributes to the development of retinal angiogenesis and pathological ocular neovascularization. Endothelial SLC38A5, an amino acid (AA) transporter, regulates developmental and pathological retinal angiogenesis by controlling the uptake of AA nutrient, which may serve as metabolic fuel for the proliferation of endothelial cells (ECs) and consequent promotion of angiogenesis. Our data provide an important step towards elucidating the molecular pathophysiology of PSCR that may explain the differences in ocular manifestations between individuals with hemoglobinopathies and afford insights for new alternative strategies to inhibit pathological angiogenesis.
增殖性镰状细胞性视网膜病变(HbSC)是镰状细胞病的一种不太严重的形式,它对视网膜的影响更为频繁,患者发生增殖性视网膜病变的几率更高,可发展为视力丧失。本研究旨在确定与增殖性镰状细胞视网膜病变(PSCR)病理生理学相关的内皮细胞衍生分子的表达差异。研究人员利用 RNAseq 比较了镰状细胞血红蛋白病和增殖性视网膜病变患者(5 人)与无视网膜病变的镰状细胞患者(3 人)的循环内皮集落形成细胞的基因表达谱。实时聚合酶链反应(qRT-PCR)用于验证 RNAseq 结果。共发现 134 个差异表达基因(DEGs)。DEGs主要与血管扩张、I型干扰素信号转导、先天免疫和血管生成有关。在已发现的 DEGs 中,我们特别强调了上调最多的基因 ROBO1(log2FoldChange = 4.32,FDR = 1.35E-11)和 SLC38A5(log2FoldChange = 3.36,FDR = 1.59E-07)。ROBO1是一种轴突引导的受体,能促进内皮细胞迁移,有助于视网膜血管生成和病理性眼部新生血管的发展。内皮细胞 SLC38A5 是一种氨基酸(AA)转运体,它通过控制 AA 营养物质的摄取来调节发育期和病理性视网膜血管生成,AA 营养物质可作为内皮细胞(ECs)增殖的代谢燃料,从而促进血管生成。我们的数据为阐明 PSCR 的分子病理生理学迈出了重要一步,这可能解释了血红蛋白病个体间眼部表现的差异,并为抑制病理性血管生成的新替代策略提供了启示。
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引用次数: 0
Legumain in cardiovascular diseases Legumain 在心血管疾病中的作用
IF 2.8 4区 医学 Q2 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-07-22 DOI: 10.3389/ebm.2024.10121
Lei Zhou, Jianqiang Wu, Zairong Wei, Yuehong Zheng
Cardiovascular diseases (CVDs) are the leading cause of death worldwide, having become a global public health problem, so the pathophysiological mechanisms and therapeutic strategies of CVDs need further study. Legumain is a powerful enzyme that is widely distributed in mammals and plays an important role in a variety of biological processes. Recent research suggests that legumain is associated with the occurrence and progression of CVDs. In this review, we provide a comprehensive overview of legumain in the pathogenesis of CVDs. The role of legumain in CVDs, such as carotid atherosclerosis, pulmonary hypertension, coronary artery disease, peripheral arterial disease, aortic aneurysms and dissection, is discussed. The potential applications of legumain as a biomarker of these diseases are also explored. By understanding the role of legumain in the pathogenesis of CVDs, we aim to support new therapeutic strategies to prevent or treat these diseases.
心血管疾病(CVDs)是导致全球死亡的主要原因,已成为一个全球性的公共卫生问题,因此CVDs的病理生理机制和治疗策略需要进一步研究。豆豆蛋白酶是一种功能强大的酶,广泛分布于哺乳动物体内,在多种生物过程中发挥着重要作用。最新研究表明,豆豆蛋白酶与心血管疾病的发生和发展有关。在这篇综述中,我们将全面概述豆豆蛋白酶在心血管疾病发病机制中的作用。我们讨论了豆豆蛋白酶在颈动脉粥样硬化、肺动脉高压、冠心病、外周动脉疾病、主动脉瘤和夹层等心血管疾病中的作用。此外,还探讨了豆豆蛋白酶作为这些疾病的生物标志物的潜在应用。通过了解豆豆蛋白酶在心血管疾病发病机制中的作用,我们希望为预防或治疗这些疾病的新治疗策略提供支持。
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引用次数: 0
The causal relationship between autoimmune diseases and rhinosinusitis, and the mediating role of inflammatory proteins: a Mendelian randomization study 自身免疫性疾病与鼻炎之间的因果关系以及炎症蛋白的中介作用:孟德尔随机研究
IF 2.8 4区 医学 Q2 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-07-22 DOI: 10.3389/ebm.2024.10196
Yanjing Liang, Shao Yin, Xiangyan Chen, Chengen Li, Qiu Chen
Observational studies have linked autoimmune diseases (ADs) with rhinosinusitis (RS) manifestations. To establish a causal relationship between ADs and RS, and to explore the potential mediating role of inflammatory mediators between ADs and RS, we utilized Mendelian randomization (MR) analysis. Using a two-sample MR methodology, we examined the causality between multiple sclerosis (MS), rheumatoid arthritis (RA), ankylosing spondylitis (AS), psoriasis (PsO), type 1 diabetes (T1D), Sjogren’s syndrome (SS), celiac disease (CeD), Crohn’s disease (CD), hypothyroidism (HT), Graves’ disease (GD), and Hashimoto’s thyroiditis and their association with chronic and acute rhinosinusitis (CRS and ARS, respectively).To achieve this, we employed three distinct MR techniques: inverse variance weighting (IVW), MR-Egger, and the weighted median method. Our analysis also included a variety of sensitivity assessments, such as Cochran’s Q test, leave-one-out analysis, MR-Egger intercept, and MR-PRESSO, to ensure the robustness of our findings. Additionally, the study explored the role of inflammation proteins as a mediator in these relationships through a comprehensive two-step MR analysis. Among the ADs, MS, RA, T1D, CeD, and HT were determined as risk factors for CRS. Only CeD exhibited a causal relationship with ARS. Subsequent analyses identified interleukin-10 (IL-10) as a potential mediator for the association of MS, RA and HT with CRS, respectively., while C-X-C motif chemokine 10 levels (CXCL10) and T-cell surface glycoprotein CD6 isoform levels (CD6) were found to influence HT’s effect on CRS. Our findings demonstrate a causative link between specific autoimmune diseases and rhinosinusitis, highlighting IL-10, CXCL10, and CD6 as potential mediators in this association.
观察性研究发现,自身免疫性疾病(ADs)与鼻炎(RS)表现有关。为了确定自身免疫性疾病与鼻炎之间的因果关系,并探索炎症介质在自身免疫性疾病与鼻炎之间的潜在中介作用,我们采用了孟德尔随机分析法(MR)。利用双样本 MR 方法,我们研究了多发性硬化症(MS)、类风湿性关节炎(RA)、强直性脊柱炎(AS)、银屑病(PsO)、1 型糖尿病(T1D)、斯约格伦综合征(SS)、乳糜泻(CeD)、胰腺炎(Celiac disease)、糖尿病(T1D)、胰腺癌(SS)、胰腺癌综合征(SS)、胰腺癌综合征(SS)之间的因果关系、我们采用了三种不同的研究方法来研究这些疾病与慢性和急性鼻炎(分别为 CRS 和 ARS)之间的关系。为此,我们采用了三种不同的 MR 技术:逆方差加权法(IVW)、MR-Egger 和加权中值法。我们的分析还包括各种敏感性评估,如 Cochran's Q 检验、leave-one-out 分析、MR-Egger 截距和 MR-PRESSO,以确保研究结果的稳健性。此外,本研究还通过全面的两步 MR 分析,探讨了炎症蛋白在这些关系中的中介作用。在 ADs 中,MS、RA、T1D、CeD 和 HT 被确定为 CRS 的风险因素。只有 CeD 与 ARS 存在因果关系。随后的分析发现,白细胞介素-10(IL-10)分别是 MS、RA 和 HT 与 CRS 关联的潜在中介因子,而 C-X-C motif 趋化因子 10 水平(CXCL10)和 T 细胞表面糖蛋白 CD6 异构体水平(CD6)则影响 HT 对 CRS 的影响。我们的研究结果表明,特定的自身免疫性疾病与鼻炎之间存在因果关系,IL-10、CXCL10 和 CD6 是这种关系的潜在介质。
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引用次数: 0
Identification of potential biomarkers for cerebral palsy and the development of prediction models. 确定脑瘫的潜在生物标志物并开发预测模型。
IF 2.8 4区 医学 Q2 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-07-09 eCollection Date: 2024-01-01 DOI: 10.3389/ebm.2024.10101
Haoyang Zheng, Duo Zhang, Yong Gan, Zesheng Peng, Yuyi Wu, Wei Xiang

Cerebral palsy (CP) is a prevalent motor disorder originating from early brain injury or malformation, with significant variability in its clinical presentation and etiology. Early diagnosis and personalized therapeutic interventions are hindered by the lack of reliable biomarkers. This study aims to identify potential biomarkers for cerebral palsy and develop predictive models to enhance early diagnosis and prognosis. We conducted a comprehensive bioinformatics analysis of gene expression profiles in muscle samples from CP patients to identify candidate biomarkers. Six key genes (CKMT2, TNNT2, MYH4, MYH1, GOT1, and LPL) were validated in an independent cohort, and potential biological pathways and molecular networks involved in CP pathogenesis were analyzed. The importance of processes such as functional regulation, energy metabolism, and cell signaling pathways in the muscles of CP patients was emphasized. Predictive models of muscle sample biomarkers related to CP were developed and visualized. Calibration curves and receiver operating characteristic analysis demonstrated that the predictive models exhibit high sensitivity and specificity in distinguishing individuals at risk of CP. The identified biomarkers and developed prediction models offer significant potential for early diagnosis and personalized management of CP. Future research should focus on validating these biomarkers in larger cohorts and integrating them into clinical practice to improve outcomes for individuals with CP.

脑性瘫痪(CP)是一种常见的运动障碍疾病,源于早期脑损伤或畸形,其临床表现和病因有很大差异。由于缺乏可靠的生物标志物,阻碍了早期诊断和个性化治疗干预。本研究旨在确定脑瘫的潜在生物标志物,并开发预测模型,以提高早期诊断和预后。我们对 CP 患者肌肉样本的基因表达谱进行了全面的生物信息学分析,以确定候选生物标志物。我们在一个独立队列中验证了六个关键基因(CKMT2、TNNT2、MYH4、MYH1、GOT1 和 LPL),并分析了参与 CP 发病机制的潜在生物通路和分子网络。研究强调了功能调节、能量代谢和细胞信号通路等过程在 CP 患者肌肉中的重要性。建立了与 CP 相关的肌肉样本生物标记物预测模型,并将其可视化。校准曲线和接收器操作特征分析表明,预测模型在区分有患心绞痛风险的个体方面具有很高的灵敏度和特异性。已确定的生物标志物和已开发的预测模型为 CP 的早期诊断和个性化管理提供了巨大的潜力。未来的研究应侧重于在更大的群体中验证这些生物标志物,并将其纳入临床实践,以改善 CP 患者的预后。
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引用次数: 0
CDKL3 is a promising biomarker for diagnosis and prognosis prediction in patients with hepatocellular carcinoma. CDKL3 是一种很有前景的生物标记物,可用于肝细胞癌患者的诊断和预后预测。
IF 2.8 4区 医学 Q2 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-06-27 eCollection Date: 2024-01-01 DOI: 10.3389/ebm.2024.10106
Qingsi Wu, Mengran Lu, Huijuan Ouyang, Tingting Zhou, Jingyuan Lei, Panpan Wang, Wei Wang

Cyclin-dependent kinase-like 3 (CDKL3) has been identified as an oncogene in certain types of tumors. Nonetheless, its function in hepatocellular carcinoma (HCC) is poorly understood. In this study, we conducted a comprehensive analysis of CDKL3 based on data from the HCC cohort of The Cancer Genome Atlas (TCGA). Our analysis included gene expression, diagnosis, prognosis, functional enrichment, tumor microenvironment and metabolic characteristics, tumor burden, mRNA expression-based stemness, alternative splicing, and prediction of therapy response. Additionally, we performed a cell counting kit-8 assay, TdT-mediated dUTP nick-end Labeling staining, migration assay, wound healing assay, colony formation assay, and nude mouse experiments to confirm the functional relevance of CDKL3 in HCC. Our findings showed that CDKL3 was significantly upregulated in HCC patients compared to controls. Various bioinformatic analyses suggested that CDKL3 could serve as a potential marker for HCC diagnosis and prognosis. Furthermore, CDKL3 was found to be involved in various mechanisms linked to the development of HCC, including copy number variation, tumor burden, genomic heterogeneity, cancer stemness, and alternative splicing of CDKL3. Notably, CDKL3 was also closely correlated with tumor immune cell infiltration and the expression of immune checkpoint markers. Additionally, CDKL3 was shown to independently function as a risk predictor for overall survival in HCC patients by multivariate Cox regression analysis. Furthermore, the knockdown of CDKL3 significantly inhibited cell proliferation in vitro and in vivo, indicating its role as an oncogene in HCC. Taken together, our findings suggest that CDKL3 shows promise as a biomarker for the detection and treatment outcome prediction of HCC patients.

细胞周期蛋白依赖性激酶样 3(CDKL3)已被确定为某些类型肿瘤的致癌基因。然而,人们对它在肝细胞癌(HCC)中的功能却知之甚少。在本研究中,我们根据癌症基因组图谱(TCGA)HCC 队列中的数据对 CDKL3 进行了全面分析。我们的分析包括基因表达、诊断、预后、功能富集、肿瘤微环境和代谢特征、肿瘤负荷、基于 mRNA 表达的干性、替代剪接以及治疗反应预测。此外,我们还进行了细胞计数试剂盒-8测定、TdT介导的dUTP缺口末端标记染色、迁移测定、伤口愈合测定、集落形成测定和裸鼠实验,以证实CDKL3在HCC中的功能相关性。我们的研究结果表明,与对照组相比,CDKL3在HCC患者中明显上调。各种生物信息学分析表明,CDKL3可作为HCC诊断和预后的潜在标志物。此外,研究还发现 CDKL3 参与了与 HCC 发展相关的各种机制,包括拷贝数变异、肿瘤负荷、基因组异质性、癌症干性和 CDKL3 的替代剪接。值得注意的是,CDKL3 还与肿瘤免疫细胞浸润和免疫检查点标记物的表达密切相关。此外,多变量考克斯回归分析表明,CDKL3可独立作为HCC患者总生存期的风险预测因子。此外,敲除 CDKL3 能明显抑制体外和体内的细胞增殖,这表明 CDKL3 在 HCC 中扮演着癌基因的角色。综上所述,我们的研究结果表明,CDKL3有望成为检测和预测HCC患者治疗结果的生物标志物。
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引用次数: 0
Potential therapeutic effects of peroxisome proliferator-activated receptors on corneal diseases. 过氧化物酶体增殖激活受体对角膜疾病的潜在治疗作用。
IF 2.8 4区 医学 Q2 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-06-27 eCollection Date: 2024-01-01 DOI: 10.3389/ebm.2024.10142
Bing Jie Chow, Isabelle Xin Yu Lee, Chang Liu, Yu-Chi Liu

The cornea is an avascular tissue in the eye that has multiple functions in the eye to maintain clear vision which can significantly impair one's vision when subjected to damage. Peroxisome proliferator-activated receptors (PPARs), a family of nuclear receptor proteins comprising three different peroxisome proliferator-activated receptor (PPAR) isoforms, namely, PPAR alpha (α), PPAR gamma (γ), and PPAR delta (δ), have emerged as potential therapeutic targets for treating corneal diseases. In this review, we summarised the current literature on the therapeutic effects of PPAR agents on corneal diseases. We discussed the role of PPARs in the modulation of corneal wound healing, suppression of corneal inflammation, neovascularisation, fibrosis, stimulation of corneal nerve regeneration, and amelioration of dry eye by inhibiting oxidative stress within the cornea. We also discussed the underlying mechanisms of these therapeutic effects. Future clinical trials are warranted to further attest to the clinical therapeutic efficacy.

角膜是眼睛中的一种无血管组织,在眼睛中具有维持清晰视力的多种功能,一旦受到损伤,就会严重影响视力。过氧化物酶体增殖激活受体(PPAR)是一个核受体蛋白家族,由三种不同的过氧化物酶体增殖激活受体(PPAR)异构体组成,即 PPAR α(α)、PPAR γ(γ)和 PPAR δ(δ)。在这篇综述中,我们总结了目前有关 PPAR 药物对角膜疾病治疗效果的文献。我们讨论了 PPAR 在调节角膜伤口愈合、抑制角膜炎症、新生血管形成、纤维化、刺激角膜神经再生以及通过抑制角膜氧化应激改善干眼症等方面的作用。我们还讨论了这些治疗效果的内在机制。未来的临床试验将进一步证实其临床疗效。
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引用次数: 0
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Experimental Biology and Medicine
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