噻吩磺酰胺衍生物的分子对接、ADME 特性和合成。

IF 2.1 4区 医学 Q3 CHEMISTRY, MULTIDISCIPLINARY Drug and Chemical Toxicology Pub Date : 2024-11-13 DOI:10.1080/01480545.2024.2417963
Jesurajan Jebamani, Jayadev Shivalingappa, Shubha Pranesh, Mussuvir Pasha, Chandrakant Pawar
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引用次数: 0

摘要

本研究利用计算分子对接技术研究了含有噻吩磺酰胺基团(7a-7s)的目标分子的类药物特性。以蛋白 2NSD(烯酰酰基载体蛋白还原酶 InhA,与 N-(4-甲基苯甲酰基)-4-苄基哌啶复合物,PDB DOI: 10.2210/pdb2NSD/pdb)为受体,评估了这些衍生物的结合相互作用。分子对接结果显示,所有化合物的对接得分均在 -6 至 -12 kcal/mol 之间。特别是化合物 7e、7i 和 7f,它们的滑翔得分令人印象深刻(>11 kcal/mol),因此被选中通过分子动力学模拟进行进一步分析,从而更深入地了解它们的动态行为和稳定性。这些分子的类药物特性是根据利平斯基五法则和 ADME(吸收、分布、代谢和排泄)标准进行评估的,并与已知药物进行了比较。此外,我们还用镍催化剂取代钯,利用铃木-宫浦偶联合成了这些目标分子(7a-7s)。我们通过元素分析、LC-MS、1H-NMR 和 13C-NMR 光谱确认了合成化合物的化学结构。
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Molecular docking, ADME properties and synthesis of thiophene sulfonamide derivatives.

This study investigates the drug-like properties of target molecules containing thiophene sulfonamide groups (7a-7s) using computational molecular docking techniques. The binding interactions of these derivatives were assessed using protein 2NSD (Enoyl acyl carrier protein reductase InhA, complexed with N-(4-methylbenzoyl)-4-benzylpiperidine, PDB DOI: 10.2210/pdb2NSD/pdb) as the receptor. Molecular docking results revealed notable docking scores for all compounds, ranging from -6 to -12 kcal/mol. Compounds 7e, 7i, and 7f, in particular, demonstrated impressive glide scores (>11 kcal/mol) and were selected for further analysis through molecular dynamics simulations, which provided deeper insights into their dynamic behavior and stability. The drug-like properties of these molecules were evaluated based on Lipinski's Rule of Five and ADME (Absorption, Distribution, Metabolism, and Excretion) criteria and compared with known drugs. Additionally, we synthesized these target molecules (7a-7s) using Suzuki-Miyaura coupling with a nickel catalyst replacing palladium. The chemical structures of the synthesized compounds were confirmed through elemental analysis, LC-MS,1H-NMR, and 13C-NMR spectroscopy.

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来源期刊
Drug and Chemical Toxicology
Drug and Chemical Toxicology 医学-毒理学
CiteScore
6.00
自引率
3.80%
发文量
99
审稿时长
3 months
期刊介绍: Drug and Chemical Toxicology publishes full-length research papers, review articles and short communications that encompass a broad spectrum of toxicological data surrounding risk assessment and harmful exposure. Manuscripts are considered according to their relevance to the journal. Topics include both descriptive and mechanics research that illustrates the risk assessment implications of exposure to toxic agents. Examples of suitable topics include toxicological studies, which are structural examinations on the effects of dose, metabolism, and statistical or mechanism-based approaches to risk assessment. New findings and methods, along with safety evaluations, are also acceptable. Special issues may be reserved to publish symposium summaries, reviews in toxicology, and overviews of the practical interpretation and application of toxicological data.
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