Y Djebra, X Liu, T Marin, A Tiss, M Dhaynaut, N Guehl, K Johnson, G El Fakhri, C Ma, J Ouyang
{"title":"基于扩散模型的后分布预测,用于动态宠物的动力学参数估计。","authors":"Y Djebra, X Liu, T Marin, A Tiss, M Dhaynaut, N Guehl, K Johnson, G El Fakhri, C Ma, J Ouyang","doi":"10.1109/isbi56570.2024.10635805","DOIUrl":null,"url":null,"abstract":"<p><p>Positron Emission Tomography (PET) is a valuable imaging method for studying molecular-level processes in the body, such as hyperphosphorylated tau (p-tau) protein aggregates, a hallmark of several neurodegenerative diseases including Alzheimer's disease. P-tau density and cerebral perfusion can be quantified from PET data using tracer kinetic modeling techniques. However, noise in PET images leads to uncertainty in the estimated kinetic parameters. This can be quantified in a Bayesian framework by the posterior distribution of kinetic parameters given PET measurements. Markov Chain Monte Carlo (MCMC) techniques can be employed to estimate the posterior distribution, although with significant computational needs. In this paper, we propose to leverage deep learning inference efficiency to infer the posterior distribution. A novel approach using denoising diffusion probabilistic model (DDPM) is introduced. The performance of the proposed method was evaluated on a [18F]MK6240 study and compared to an MCMC method. Our approach offered significant reduction in computation time (over 30 times faster than MCMC) and consistently predicted accurate (< 0.8 % mean error) and precise (< 5.77 % standard deviation error) posterior distributions.</p>","PeriodicalId":74566,"journal":{"name":"Proceedings. IEEE International Symposium on Biomedical Imaging","volume":"2024 ","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11554386/pdf/","citationCount":"0","resultStr":"{\"title\":\"DIFFUSION MODEL-BASED POSTERIOR DISTRIBUTION PREDICTION FOR KINETIC PARAMETER ESTIMATION IN DYNAMIC PET.\",\"authors\":\"Y Djebra, X Liu, T Marin, A Tiss, M Dhaynaut, N Guehl, K Johnson, G El Fakhri, C Ma, J Ouyang\",\"doi\":\"10.1109/isbi56570.2024.10635805\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Positron Emission Tomography (PET) is a valuable imaging method for studying molecular-level processes in the body, such as hyperphosphorylated tau (p-tau) protein aggregates, a hallmark of several neurodegenerative diseases including Alzheimer's disease. P-tau density and cerebral perfusion can be quantified from PET data using tracer kinetic modeling techniques. However, noise in PET images leads to uncertainty in the estimated kinetic parameters. This can be quantified in a Bayesian framework by the posterior distribution of kinetic parameters given PET measurements. Markov Chain Monte Carlo (MCMC) techniques can be employed to estimate the posterior distribution, although with significant computational needs. In this paper, we propose to leverage deep learning inference efficiency to infer the posterior distribution. A novel approach using denoising diffusion probabilistic model (DDPM) is introduced. The performance of the proposed method was evaluated on a [18F]MK6240 study and compared to an MCMC method. Our approach offered significant reduction in computation time (over 30 times faster than MCMC) and consistently predicted accurate (< 0.8 % mean error) and precise (< 5.77 % standard deviation error) posterior distributions.</p>\",\"PeriodicalId\":74566,\"journal\":{\"name\":\"Proceedings. IEEE International Symposium on Biomedical Imaging\",\"volume\":\"2024 \",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2024-05-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11554386/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Proceedings. IEEE International Symposium on Biomedical Imaging\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1109/isbi56570.2024.10635805\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/8/22 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Proceedings. IEEE International Symposium on Biomedical Imaging","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/isbi56570.2024.10635805","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/8/22 0:00:00","PubModel":"Epub","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
摘要
正电子发射断层扫描(PET)是研究体内分子水平过程的一种重要成像方法,例如高磷酸化 tau(p-tau)蛋白聚集,这是包括阿尔茨海默病在内的多种神经退行性疾病的标志。利用示踪剂动力学建模技术,可以从 PET 数据中量化 P-tau 密度和脑灌注。然而,PET 图像中的噪声会导致估计动力学参数的不确定性。这可以在贝叶斯框架中通过给定 PET 测量值的动力学参数后验分布来量化。马尔可夫链蒙特卡罗(MCMC)技术可用于估计后验分布,但需要大量计算。在本文中,我们建议利用深度学习推理的效率来推断后验分布。本文介绍了一种使用去噪扩散概率模型(DDPM)的新方法。我们在[18F]MK6240 研究中评估了所提方法的性能,并将其与 MCMC 方法进行了比较。我们的方法大大减少了计算时间(比 MCMC 方法快 30 多倍),并能持续预测准确(平均误差小于 0.8%)和精确(标准偏差误差小于 5.77%)的后验分布。
DIFFUSION MODEL-BASED POSTERIOR DISTRIBUTION PREDICTION FOR KINETIC PARAMETER ESTIMATION IN DYNAMIC PET.
Positron Emission Tomography (PET) is a valuable imaging method for studying molecular-level processes in the body, such as hyperphosphorylated tau (p-tau) protein aggregates, a hallmark of several neurodegenerative diseases including Alzheimer's disease. P-tau density and cerebral perfusion can be quantified from PET data using tracer kinetic modeling techniques. However, noise in PET images leads to uncertainty in the estimated kinetic parameters. This can be quantified in a Bayesian framework by the posterior distribution of kinetic parameters given PET measurements. Markov Chain Monte Carlo (MCMC) techniques can be employed to estimate the posterior distribution, although with significant computational needs. In this paper, we propose to leverage deep learning inference efficiency to infer the posterior distribution. A novel approach using denoising diffusion probabilistic model (DDPM) is introduced. The performance of the proposed method was evaluated on a [18F]MK6240 study and compared to an MCMC method. Our approach offered significant reduction in computation time (over 30 times faster than MCMC) and consistently predicted accurate (< 0.8 % mean error) and precise (< 5.77 % standard deviation error) posterior distributions.