Hua-Ying Chen , Yue He , Xiao-Yuan Wang , Ming-Jie Ye , Chao Chen , Ruo-Can Qian , Da-Wei Li
{"title":"深度学习辅助表面增强拉曼光谱检测细胞内活性氧物种","authors":"Hua-Ying Chen , Yue He , Xiao-Yuan Wang , Ming-Jie Ye , Chao Chen , Ruo-Can Qian , Da-Wei Li","doi":"10.1016/j.talanta.2024.127222","DOIUrl":null,"url":null,"abstract":"<div><div>Realizing the intelligent analysis of the intracellular reactive oxygen species (ROS) is beneficial to quick diagnosis of diseases. Herein, surface-enhanced Raman spectroscopy (SERS) technology was combined with deep learning to establish a smart detection method of intracellular ROS based on neural network to improve the SERS analysis ability. Taking the simultaneous detection of peroxynitrite (ONOO<sup>−</sup>) and hypochlorite (ClO<sup>−</sup>) as the templates, 4-mercaptophenylboric acid (4-MPBA) and 2-mercapto-4-methoxyphenol (2-MP) molecules were modified on the AuNPs to prepare AuNP/4-MPBA/2-MP nanoprobes. The SERS spectra of AuNP/4-MPBA/2-MP nanoprobes before and after the specific response of ONOO<sup>−</sup> and ClO<sup>−</sup> were collected to construct a database, and the neural network model for extraction (ENN) and one-dimensional convolutional neural network model (1D-CNN) for quantification were built. The cosine similarity values of ENN model for ONOO<sup>−</sup> and ClO<sup>−</sup> correlation spectra were 0.997 and 0.995, respectively. In addition, the qualitative and quantitative results of the models were basically consistent with the experimental results. Moreover, the models can accurately extract the SERS response spectral information of ONOO<sup>−</sup> and ClO<sup>−</sup> and realize their preliminary prediction of concentration in living cells, which has great potential in the high-throughput smart processing and accurate analysis of large-scale complicated SERS data from biological system.</div></div>","PeriodicalId":435,"journal":{"name":"Talanta","volume":"284 ","pages":"Article 127222"},"PeriodicalIF":5.6000,"publicationDate":"2024-11-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Deep learning-assisted surface-enhanced Raman spectroscopy detection of intracellular reactive oxygen species\",\"authors\":\"Hua-Ying Chen , Yue He , Xiao-Yuan Wang , Ming-Jie Ye , Chao Chen , Ruo-Can Qian , Da-Wei Li\",\"doi\":\"10.1016/j.talanta.2024.127222\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>Realizing the intelligent analysis of the intracellular reactive oxygen species (ROS) is beneficial to quick diagnosis of diseases. Herein, surface-enhanced Raman spectroscopy (SERS) technology was combined with deep learning to establish a smart detection method of intracellular ROS based on neural network to improve the SERS analysis ability. Taking the simultaneous detection of peroxynitrite (ONOO<sup>−</sup>) and hypochlorite (ClO<sup>−</sup>) as the templates, 4-mercaptophenylboric acid (4-MPBA) and 2-mercapto-4-methoxyphenol (2-MP) molecules were modified on the AuNPs to prepare AuNP/4-MPBA/2-MP nanoprobes. The SERS spectra of AuNP/4-MPBA/2-MP nanoprobes before and after the specific response of ONOO<sup>−</sup> and ClO<sup>−</sup> were collected to construct a database, and the neural network model for extraction (ENN) and one-dimensional convolutional neural network model (1D-CNN) for quantification were built. The cosine similarity values of ENN model for ONOO<sup>−</sup> and ClO<sup>−</sup> correlation spectra were 0.997 and 0.995, respectively. In addition, the qualitative and quantitative results of the models were basically consistent with the experimental results. Moreover, the models can accurately extract the SERS response spectral information of ONOO<sup>−</sup> and ClO<sup>−</sup> and realize their preliminary prediction of concentration in living cells, which has great potential in the high-throughput smart processing and accurate analysis of large-scale complicated SERS data from biological system.</div></div>\",\"PeriodicalId\":435,\"journal\":{\"name\":\"Talanta\",\"volume\":\"284 \",\"pages\":\"Article 127222\"},\"PeriodicalIF\":5.6000,\"publicationDate\":\"2024-11-15\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Talanta\",\"FirstCategoryId\":\"92\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0039914024016011\",\"RegionNum\":1,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"CHEMISTRY, ANALYTICAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Talanta","FirstCategoryId":"92","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0039914024016011","RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"CHEMISTRY, ANALYTICAL","Score":null,"Total":0}
Deep learning-assisted surface-enhanced Raman spectroscopy detection of intracellular reactive oxygen species
Realizing the intelligent analysis of the intracellular reactive oxygen species (ROS) is beneficial to quick diagnosis of diseases. Herein, surface-enhanced Raman spectroscopy (SERS) technology was combined with deep learning to establish a smart detection method of intracellular ROS based on neural network to improve the SERS analysis ability. Taking the simultaneous detection of peroxynitrite (ONOO−) and hypochlorite (ClO−) as the templates, 4-mercaptophenylboric acid (4-MPBA) and 2-mercapto-4-methoxyphenol (2-MP) molecules were modified on the AuNPs to prepare AuNP/4-MPBA/2-MP nanoprobes. The SERS spectra of AuNP/4-MPBA/2-MP nanoprobes before and after the specific response of ONOO− and ClO− were collected to construct a database, and the neural network model for extraction (ENN) and one-dimensional convolutional neural network model (1D-CNN) for quantification were built. The cosine similarity values of ENN model for ONOO− and ClO− correlation spectra were 0.997 and 0.995, respectively. In addition, the qualitative and quantitative results of the models were basically consistent with the experimental results. Moreover, the models can accurately extract the SERS response spectral information of ONOO− and ClO− and realize their preliminary prediction of concentration in living cells, which has great potential in the high-throughput smart processing and accurate analysis of large-scale complicated SERS data from biological system.
期刊介绍:
Talanta provides a forum for the publication of original research papers, short communications, and critical reviews in all branches of pure and applied analytical chemistry. Papers are evaluated based on established guidelines, including the fundamental nature of the study, scientific novelty, substantial improvement or advantage over existing technology or methods, and demonstrated analytical applicability. Original research papers on fundamental studies, and on novel sensor and instrumentation developments, are encouraged. Novel or improved applications in areas such as clinical and biological chemistry, environmental analysis, geochemistry, materials science and engineering, and analytical platforms for omics development are welcome.
Analytical performance of methods should be determined, including interference and matrix effects, and methods should be validated by comparison with a standard method, or analysis of a certified reference material. Simple spiking recoveries may not be sufficient. The developed method should especially comprise information on selectivity, sensitivity, detection limits, accuracy, and reliability. However, applying official validation or robustness studies to a routine method or technique does not necessarily constitute novelty. Proper statistical treatment of the data should be provided. Relevant literature should be cited, including related publications by the authors, and authors should discuss how their proposed methodology compares with previously reported methods.