基于肿瘤抑制因子ERRFI1的ceRNA网络和瘢痕疙瘩疾病诊断模型的构建

IF 3.5 3区 医学 Q1 DERMATOLOGY Experimental Dermatology Pub Date : 2024-11-19 DOI:10.1111/exd.70004
Pengsheng Chen, Qingfu Su, Xingong Lin, Xianying Zhou, Wanting Yao, Xiaxinqiu Hua, Yanyan Huang, Rongrong Xie, Huiyong Liu, Chaoyang Wang
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引用次数: 0

摘要

本研究旨在确定具有重要诊断价值的瘢痕疙瘩(KD)关键生物标志物,并构建相关的竞争性内源性RNA(ceRNA)网络和疾病诊断模型,为KD的早期诊断和预防提供新思路。利用公共数据库确定KD的关键基因。富集分析和免疫细胞浸润(ICI)分析揭示了其功能和免疫特征。然后,构建了ceRNA网络以探索其潜在的通路。应用随机森林(RF)分析构建了KD疾病诊断的预测模型。最后,免疫组化(IHC)和 RT-qPCR 被用来验证关键基因的差异表达。ERRFI1被确定为KD的关键生物标志物,并且在KD中低表达。ceRNA网络显示,H0TAIRM1-has-miR-148a-3p-ERRFI1可能是KD的一个潜在通路。最后,构建了一个双基因诊断预测模型(ERRFI1、HSD3B7)并进行了外部验证,结果表明该模型具有良好的诊断性能。ERRFI1是KD的一个下调基因,有望成为一个有前途的预测标志物和疾病诊断基因。ICI可能在KD的进展中发挥作用。ceRNA网络可能为KD的潜在发病机制提供新线索。最后,新的 KD 诊断模型可以成为评估 KD 发病风险的有效工具。
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Construction of ceRNA Network and Disease Diagnosis Model for Keloid Based on Tumor Suppressor ERRFI1

The aim of this study is to identify the key biomarker of keloid (KD) with significant diagnostic value and to construct the related competing endogenous RNA (ceRNA) network and disease diagnostic model to provide new ideas for the early diagnosis and prevention of KD. Public databases were used to identify the key gene of KD. Enrichment analysis and immune cell infiltration (ICI) analysis revealed its functional and immune characteristics. Then, a ceRNA network was constructed to explore the potential pathways of it. Random forest (RF) analysis was applied to construct a predictive model for the disease diagnosis of KD. Finally, immunohistochemistry (IHC) and RT-qPCR were used to verify the differential expression of key gene. ERRFI1 was identified as a key biomarker in KD and was lowly expressed in KD. The ceRNA network revealed that H0TAIRM1-has-miR-148a-3p-ERRFI1 may be a potential pathway in KD. Finally, a 2-gene diagnostic prediction model (ERRFI1, HSD3B7) was constructed and externally validated and the results suggested that the model had good diagnostic performance. ERRFI1 is a downregulated gene in KD and is expected to be a promising predictive marker and disease diagnostic gene. ICI may play a role in the progression of KD. The ceRNA network may provide new clues to the potential pathogenesis of KD. Finally, the new KD diagnostic model could be an effective tool for assessing the risk of KD development.

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来源期刊
Experimental Dermatology
Experimental Dermatology 医学-皮肤病学
CiteScore
6.70
自引率
5.60%
发文量
201
审稿时长
2 months
期刊介绍: Experimental Dermatology provides a vehicle for the rapid publication of innovative and definitive reports, letters to the editor and review articles covering all aspects of experimental dermatology. Preference is given to papers of immediate importance to other investigators, either by virtue of their new methodology, experimental data or new ideas. The essential criteria for publication are clarity, experimental soundness and novelty. Letters to the editor related to published reports may also be accepted, provided that they are short and scientifically relevant to the reports mentioned, in order to provide a continuing forum for discussion. Review articles represent a state-of-the-art overview and are invited by the editors.
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