探索腺嘌呤、胞嘧啶和鸟嘌呤与石墨烯的电子相互作用:DFT 研究。

IF 2.5 4区 化学 Q2 CHEMISTRY, MULTIDISCIPLINARY ChemistryOpen Pub Date : 2024-11-19 DOI:10.1002/open.202400350
Jawaher Qasem, Baliram Lone
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引用次数: 0

摘要

这项研究为石墨烯与 DNA 核碱基(腺嘌呤、胞嘧啶和鸟嘌呤)之间的相互作用提供了新的见解。研究比较了每种核碱基与石墨烯的相互作用,考察了它们的选择性和结合能。研究还探讨了这些相互作用如何影响石墨烯的电子特性,显示了基于石墨烯的生物传感器和 DNA 测序技术的潜在应用。此外,研究结果还提出了 DNA 传感和石墨烯功能化在各种生物医学应用中的潜在用途。本研究采用密度泛函理论(DFT)方法,利用具有 6-311G 基集的 B3LYP 函数,探索 DNA 核碱基(腺嘌呤、胞嘧啶和鸟嘌呤)与纯石墨烯(Gr)之间的电子相互作用。我们研究了各种特性,包括吸附能、HOMO-LUMO 能级、电荷转移机制、偶极矩、能隙和状态密度 (DOS)。我们的研究结果表明,胞嘧啶通过其氧位点(Gr-Cyt-O)与石墨烯产生最有利的相互作用,表现出最强的吸附性。此外,腺嘌呤的相互作用显著增强了其电负性和化学势,尤其是在氮位,同时降低了其亲电性。鸟嘌呤的能隙最小,在核碱基中具有最高的导电性。这些结果表明,石墨烯作为鸟嘌呤的吸附剂具有优势特性,突出了其在生物传感器技术中的潜在应用。
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Exploring the Electronic Interactions of Adenine, Cytosine, and Guanine with Graphene: A DFT Study.

This study has provided new insights into the interaction between graphene and DNA nucleobases (adenine, cytosine, and guanine). It compares how each nucleobase interacts with graphene, examining their selectivity and binding energy. The research also explores how these interactions impact the electronic properties of graphene, showing potential applications in graphene-based biosensors and DNA sequencing technologies. Additionally, the findings suggest potential uses in DNA sensing and the functionalization of graphene for various biomedical applications. This study employs density functional theory (DFT) methods, utilizing the B3LYP functional with the 6-311G basis set, to explore the electronic interactions between DNA nucleobases (adenine, cytosine, and guanine) with pure graphene (Gr). We investigate various properties, including adsorption energy, HOMO-LUMO energy levels, charge transfer mechanisms, dipole moments, energy gaps, and density of states (DOS). Our findings indicate that cytosine interacts most favorably with graphene through its oxygen site (Gr-Cyt-O), exhibiting the strongest adsorption. Additionally, adenine's interaction significantly enhances its electronegativity and chemical potential, particularly at the nitrogen position, while decreasing its electrophilicity. Guanine, characterized by the smallest energy gap, demonstrates the highest conductivity among the nucleobases. These results suggest that graphene possesses advantageous properties as an adsorbent for guanine, highlighting its potential applications in biosensor technology.

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来源期刊
ChemistryOpen
ChemistryOpen CHEMISTRY, MULTIDISCIPLINARY-
CiteScore
4.80
自引率
4.30%
发文量
143
审稿时长
1 months
期刊介绍: ChemistryOpen is a multidisciplinary, gold-road open-access, international forum for the publication of outstanding Reviews, Full Papers, and Communications from all areas of chemistry and related fields. It is co-owned by 16 continental European Chemical Societies, who have banded together in the alliance called ChemPubSoc Europe for the purpose of publishing high-quality journals in the field of chemistry and its border disciplines. As some of the governments of the countries represented in ChemPubSoc Europe have strongly recommended that the research conducted with their funding is freely accessible for all readers (Open Access), ChemPubSoc Europe was concerned that no journal for which the ethical standards were monitored by a chemical society was available for such papers. ChemistryOpen fills this gap.
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