PANoptosis 相关基因:溃疡性结肠炎免疫调节失调的分子见解。

IF 3.7 3区 医学 Q2 GASTROENTEROLOGY & HEPATOLOGY Journal of Gastroenterology and Hepatology Pub Date : 2024-11-20 DOI:10.1111/jgh.16804
Yuxiao Ji, Pengchong Li, Tingting Ning, Deyi Yang, Haiyun Shi, Xueyu Dong, Shengtao Zhu, Peng Li, Shutian Zhang
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引用次数: 0

摘要

背景和目的:溃疡性结肠炎(UC)是一种由免疫失调引起的慢性炎症性疾病。细胞凋亡(PANoptosis)是一种新型的程序性细胞死亡形式,已被认为与炎症性疾病有关,但其在 UC 中的具体作用仍不清楚。本研究旨在鉴定可能导致 UC 免疫失调的 PANoptosis 相关基因(PRGs):方法:通过对 GEO 数据库进行生物信息学分析,我们确定了七个枢纽 PRGs。在这些基因的基础上,我们建立了一个用于区分 UC 患者和健康对照的预测模型,并利用 ROC 曲线分析评估了该模型的诊断性能。我们进一步进行了功能富集、GSVA 和免疫浸润分析。免疫组织化学(IHC)用于验证 UC 患者中枢基因的表达:结果:基于七个枢纽基因的预测模型在区分 UC 患者和对照组方面表现出了诊断能力。此外,还发现这些中心基因与免疫细胞有关,包括树突状细胞、NK细胞、巨噬细胞、调节性T细胞(Tregs)和CD8+T细胞。它们还与涉及 UC 发病机制的关键信号通路有关,如 IFNγ、TNFα、IL6 和 JAK-STAT3,以及缺氧和细胞凋亡。免疫组化分析利用石蜡切片肠活检标本验证了 UC 患者中枢 PRGs 的表达水平:本研究发现了与 PANoptosis 相关的基因,这些基因对 UC 具有潜在的诊断价值,并提示 PANoptosis 可能通过调节特定的免疫细胞并与关键信号通路相互作用,从而促进 UC 的发病机制。这凸显了 PANoptosis 相关基因作为 UC 治疗靶点的潜在重要性。
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PANoptosis-related genes: Molecular insights into immune dysregulation in ulcerative colitis.

Background and aim: Ulcerative colitis (UC) is a chronic inflammatory disease driven by immune dysregulation. PANoptosis, a novel form of programmed cell death, has been implicated in inflammatory diseases, but its specific role in UC remains unclear. This study aimed to identify PANoptosis-related genes (PRGs) that may contribute to immune dysregulation in UC.

Methods: Using bioinformatics analysis of the GEO databases, we identified seven hub PRGs. Based on these genes, we developed a predictive model to differentiate UC patients from healthy controls, and evaluated its diagnostic performance using ROC curve analysis. We further conducted functional enrichment, GSVA, and immune infiltration analyses. Immunohistochemistry (IHC) was used to validate the expression of hub genes in UC patients.

Results: The prediction model, based on the seven hub genes, exhibited diagnostic ability in discriminating UC patients from controls. Furthermore, these hub PRGs were found to be associated with immune cells, including dendritic cells, NK cells, macrophages, regulatory T cells (Tregs), and CD8+ T cells. They were also linked to key signaling pathways implicated in UC pathogenesis, such as IFNγ, TNFα, IL6-and JAK-STAT3, as well as hypoxia and apoptosis. Immunohistochemistry analysis validated the expression levels of hub PRGs in UC patients using paraffin sections of intestinal biopsy specimens.

Conclusions: This study identified PANoptosis-related genes with potential diagnostic value for UC and suggest that PANoptosis may contribute to the pathogenesis of UC by regulating specific immune cells and interacting with key signaling pathways. This highlights the potential importance of PANoptosis-related genes as therapeutic targets in UC management.

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来源期刊
CiteScore
7.90
自引率
2.40%
发文量
326
审稿时长
2.3 months
期刊介绍: Journal of Gastroenterology and Hepatology is produced 12 times per year and publishes peer-reviewed original papers, reviews and editorials concerned with clinical practice and research in the fields of hepatology, gastroenterology and endoscopy. Papers cover the medical, radiological, pathological, biochemical, physiological and historical aspects of the subject areas. All submitted papers are reviewed by at least two referees expert in the field of the submitted paper.
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