耦合簇理论预测胸腺嘧啶中的光诱导氢解离

IF 14.7 1区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES Nature Communications Pub Date : 2024-11-22 DOI:10.1038/s41467-024-54436-2
Eirik F. Kjønstad, O. Jonathan Fajen, Alexander C. Paul, Sara Angelico, Dennis Mayer, Markus Gühr, Thomas J. A. Wolf, Todd J. Martínez, Henrik Koch
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引用次数: 0

摘要

胸腺嘧啶在紫外线辐射激发下的命运一直是激烈争论的主题。如今,人们普遍认为胸腺嘧啶的超快激发态气相衰变源于从亮ππ*态到暗nπ*态的无辐射转变。然而,相互矛盾的理论预测使得实验数据难以解释。在这里,我们以迄今为止最高的理论水平模拟了胸腺嘧啶的早期气相超快动力学。这是通过最近开发的耦合簇方法进行波包动力学模拟实现的。我们的模拟证实了ππ*到nπ*的超快转变(τ = 41 ± 14 fs)。此外,预测的氧边 X 射线吸收光谱在数量上与实验结果一致。我们还预测了一个尚未定性的 πσ* 通道,它导致两个 N-H 键之一的氢解离。在包括腺嘌呤在内的其他杂芳香族化合物中也发现了类似的行为,一些学者推测胸腺嘧啶中也可能存在类似的途径。然而,这一点从未在理论或实验中得到证实。这一预测要求我们继续努力,通过实验确定或排除这一通道的存在。
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Photoinduced hydrogen dissociation in thymine predicted by coupled cluster theory

The fate of thymine upon excitation by ultraviolet radiation has been the subject of intense debate. Today, it is widely believed that its ultrafast excited state gas phase decay stems from a radiationless transition from the bright ππ* state to a dark nπ* state. However, conflicting theoretical predictions have made the experimental data difficult to interpret. Here we simulate the early gas phase ultrafast dynamics in thymine at the highest level of theory to date. This is made possible by performing wavepacket dynamics with a recently developed coupled cluster method. Our simulation confirms an ultrafast ππ* to nπ* transition (τ = 41 ± 14 fs). Furthermore, the predicted oxygen-edge X-ray absorption spectra agree quantitatively with experiment. We also predict an as-yet uncharacterized πσ* channel that leads to hydrogen dissociation at one of the two N-H bonds. Similar behavior has been identified in other heteroaromatic compounds, including adenine, and several authors have speculated that a similar pathway may exist in thymine. However, this was never confirmed theoretically or experimentally. This prediction calls for renewed efforts to experimentally identify or exclude the presence of this channel.

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来源期刊
Nature Communications
Nature Communications Biological Science Disciplines-
CiteScore
24.90
自引率
2.40%
发文量
6928
审稿时长
3.7 months
期刊介绍: Nature Communications, an open-access journal, publishes high-quality research spanning all areas of the natural sciences. Papers featured in the journal showcase significant advances relevant to specialists in each respective field. With a 2-year impact factor of 16.6 (2022) and a median time of 8 days from submission to the first editorial decision, Nature Communications is committed to rapid dissemination of research findings. As a multidisciplinary journal, it welcomes contributions from biological, health, physical, chemical, Earth, social, mathematical, applied, and engineering sciences, aiming to highlight important breakthroughs within each domain.
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