胸大肌家族遗传的复杂性:十个家族的外显子组测序分析》(The Complexity of Familial Inheritance in Pectus Excavatum: A Ten-Family Exome Sequencing Analysis)。

IF 2.8 3区 生物学 Q2 GENETICS & HEREDITY Genes Pub Date : 2024-11-01 DOI:10.3390/genes15111429
Juan M Farina, Rory J Olson, Radhika Dhamija, Anne Bofferding, Aleksandar Sekulic, Jan B Egan, Dawn E Jaroszewski
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引用次数: 0

摘要

背景/目的:开胸症(PEx)至少部分被认为是一种家族性疾病。据报道,该病有多种遗传模式、与遗传综合征的关联以及致病变体。然而,这种疾病的病因至今仍未完全明了,也没有发现明确的致病基因。方法:本研究招募了确诊为 PEx 的家庭成员(一名疑似患者和两名一级亲属)和未受影响的成员。对所有受影响的家族性 PEx 病例进行外显子组测序,以系统筛选可能是 PEx 致病基因的候选基因,并对未受影响的家庭成员进行变异分离分析。结果共有 10 个家庭参加,每个家庭有 3 名受影响成员,提供了 30 个家族性 PEx 病例。十个家系的遗传模式各不相同,可能存在不完全渗透。REST(对神经元发育至关重要,在之前的研究中与肛门畸形有关)、SMAD4(变异可能导致胸主动脉疾病)和COL5A(与埃勒斯-丹洛斯综合征和纤维肌发育不良有关)的基因变异被初步鉴定为可能与肛门畸形的发生有关,并与表型分离。在所研究的人群中,没有发现跨家族的共同变异。结论在我们的研究中,对有多人受 PEx 影响的家族进行了种系外显子测序,发现了与 PEx 相关的潜在候选基因。这些候选基因是单个家庭的私有基因,没有发现多个家庭共有的强候选基因。这些发现表明,PEx 的遗传可能与已知基因中共享的单一遗传变异关系不大。鉴于家族性 PEx 遗传基础的证据不断积累,有必要开展进一步的研究,包括多基因分析、非编码基因组评估和可能的表观遗传标记。
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The Complexity of Familial Inheritance in Pectus Excavatum: A Ten-Family Exome Sequencing Analysis.

Background/Objectives: Pectus excavatum (PEx) is considered, at least partially, a familial disorder. A variety of inheritance patterns, associations with genetic syndromes, and pathogenic variants have been reported. However, the etiology of this condition is still not completely understood, and no known genes have been identified as definitive contributors. Methods: Family members with a confirmed PEx diagnosis (one proband and two first-degree relatives) and non-affected members were recruited into this study. Exome sequencing was performed on all affected familial PEx cases to systematically screen for candidate genes that are likely to be causative for PEx, and on non-affected family members for variant segregation analysis. Results: Ten families, with three affected members each, participated, providing thirty familial PEx cases. Different inheritance patterns were represented across the ten pedigrees, with possible incomplete penetrance. Genetic variants in REST (essential for neuronal development and associated with pectus deformities in prior studies), SMAD4 (variants can predispose individuals to thoracic aortic diseases), and COL5A (associated with Ehlers-Danlos syndrome and Fibromuscular dysplasia) were initially identified as potentially linked to the development of pectus deformities and segregated with the phenotype. No variants were shared across families in the studied population. Conclusions: Germline exome sequencing of families with multiple individuals affected by PEx in our study identified potential gene candidates linked to PEx. These candidates are private to individual families and no strong candidates shared across multiple families were identified. These findings suggest that the inheritance of PEx may not be strongly related to a shared single genetic variant in known genes. Given the accumulating evidence for the genetic basis of familial PEx, further studies, including polygenic analyses, as well as assessment of the non-coding genome and possible epigenetic markers are warranted.

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来源期刊
Genes
Genes GENETICS & HEREDITY-
CiteScore
5.20
自引率
5.70%
发文量
1975
审稿时长
22.94 days
期刊介绍: Genes (ISSN 2073-4425) is an international, peer-reviewed open access journal which provides an advanced forum for studies related to genes, genetics and genomics. It publishes reviews, research articles, communications and technical notes. There is no restriction on the length of the papers and we encourage scientists to publish their results in as much detail as possible.
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