Junjie Yang, Bo Zhong, Lan Yang, Zhan Luo, Lei Jia, Kaixi Zheng, Wenjie Tang, Wenna Shang, Xiaofeng Jiang, Zhengbing Lyu, Qijing Gai, Jianqing Chen, Guodong Chen
{"title":"Ulp1 通过 INO1 在 Pichia pastoris 中调控细胞增殖。","authors":"Junjie Yang, Bo Zhong, Lan Yang, Zhan Luo, Lei Jia, Kaixi Zheng, Wenjie Tang, Wenna Shang, Xiaofeng Jiang, Zhengbing Lyu, Qijing Gai, Jianqing Chen, Guodong Chen","doi":"10.3390/genes15111459","DOIUrl":null,"url":null,"abstract":"<p><strong>Background/objectives: </strong>Ulp1 is a vital regulator of the cell cycle, with its absence leading to G2/M phase arrest in <i>Saccharomyces cerevisiae</i>. This study aims to investigate the role of Ulp1 in cell cycle regulation in <i>Pichia pastoris</i> and to elucidate its mechanisms of action, particularly through the modulation of the gene <i>INO1</i>.</p><p><strong>Methods: </strong>We generated Ulp1 knockout strains in <i>Pichia pastoris</i> using the FLP-FRT system and performed RNA sequencing (RNA-seq) to analyze gene expression changes. We assessed cell proliferation in <i>Ulp1</i> knockout and <i>INO1</i> overexpressing strains, as well as the effects of inositol supplementation.</p><p><strong>Results: </strong>Our findings revealed significant downregulation of <i>INO1</i> and other genes in <i>Ulp1</i> knockout strains. Importantly, overexpression of <i>INO1</i> restored cell proliferation, indicating that Ulp1 regulates this process via INO1. Notably, supplementation with exogenous inositol did not rescue cell proliferation, suggesting that the enzymatic activity of INO1 is not required for Ulp1's regulatory function.</p><p><strong>Conclusions: </strong>This study demonstrates that Ulp1 modulates cell proliferation in <i>Pichia pastoris</i> through INO1, independent of its enzymatic activity. These insights enhance our understanding of Ulp1's role in cell cycle regulation and open new avenues for exploring the molecular mechanisms governing yeast cell division. Further investigations are warranted to delineate the intricate regulatory pathways involved in this process.</p>","PeriodicalId":12688,"journal":{"name":"Genes","volume":"15 11","pages":""},"PeriodicalIF":2.8000,"publicationDate":"2024-11-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11593471/pdf/","citationCount":"0","resultStr":"{\"title\":\"Ulp1 Regulates Cell Proliferation Through INO1 in <i>Pichia pastoris</i>.\",\"authors\":\"Junjie Yang, Bo Zhong, Lan Yang, Zhan Luo, Lei Jia, Kaixi Zheng, Wenjie Tang, Wenna Shang, Xiaofeng Jiang, Zhengbing Lyu, Qijing Gai, Jianqing Chen, Guodong Chen\",\"doi\":\"10.3390/genes15111459\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Background/objectives: </strong>Ulp1 is a vital regulator of the cell cycle, with its absence leading to G2/M phase arrest in <i>Saccharomyces cerevisiae</i>. This study aims to investigate the role of Ulp1 in cell cycle regulation in <i>Pichia pastoris</i> and to elucidate its mechanisms of action, particularly through the modulation of the gene <i>INO1</i>.</p><p><strong>Methods: </strong>We generated Ulp1 knockout strains in <i>Pichia pastoris</i> using the FLP-FRT system and performed RNA sequencing (RNA-seq) to analyze gene expression changes. We assessed cell proliferation in <i>Ulp1</i> knockout and <i>INO1</i> overexpressing strains, as well as the effects of inositol supplementation.</p><p><strong>Results: </strong>Our findings revealed significant downregulation of <i>INO1</i> and other genes in <i>Ulp1</i> knockout strains. Importantly, overexpression of <i>INO1</i> restored cell proliferation, indicating that Ulp1 regulates this process via INO1. Notably, supplementation with exogenous inositol did not rescue cell proliferation, suggesting that the enzymatic activity of INO1 is not required for Ulp1's regulatory function.</p><p><strong>Conclusions: </strong>This study demonstrates that Ulp1 modulates cell proliferation in <i>Pichia pastoris</i> through INO1, independent of its enzymatic activity. These insights enhance our understanding of Ulp1's role in cell cycle regulation and open new avenues for exploring the molecular mechanisms governing yeast cell division. Further investigations are warranted to delineate the intricate regulatory pathways involved in this process.</p>\",\"PeriodicalId\":12688,\"journal\":{\"name\":\"Genes\",\"volume\":\"15 11\",\"pages\":\"\"},\"PeriodicalIF\":2.8000,\"publicationDate\":\"2024-11-13\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11593471/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Genes\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.3390/genes15111459\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"GENETICS & HEREDITY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Genes","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.3390/genes15111459","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"GENETICS & HEREDITY","Score":null,"Total":0}
Ulp1 Regulates Cell Proliferation Through INO1 in Pichia pastoris.
Background/objectives: Ulp1 is a vital regulator of the cell cycle, with its absence leading to G2/M phase arrest in Saccharomyces cerevisiae. This study aims to investigate the role of Ulp1 in cell cycle regulation in Pichia pastoris and to elucidate its mechanisms of action, particularly through the modulation of the gene INO1.
Methods: We generated Ulp1 knockout strains in Pichia pastoris using the FLP-FRT system and performed RNA sequencing (RNA-seq) to analyze gene expression changes. We assessed cell proliferation in Ulp1 knockout and INO1 overexpressing strains, as well as the effects of inositol supplementation.
Results: Our findings revealed significant downregulation of INO1 and other genes in Ulp1 knockout strains. Importantly, overexpression of INO1 restored cell proliferation, indicating that Ulp1 regulates this process via INO1. Notably, supplementation with exogenous inositol did not rescue cell proliferation, suggesting that the enzymatic activity of INO1 is not required for Ulp1's regulatory function.
Conclusions: This study demonstrates that Ulp1 modulates cell proliferation in Pichia pastoris through INO1, independent of its enzymatic activity. These insights enhance our understanding of Ulp1's role in cell cycle regulation and open new avenues for exploring the molecular mechanisms governing yeast cell division. Further investigations are warranted to delineate the intricate regulatory pathways involved in this process.
期刊介绍:
Genes (ISSN 2073-4425) is an international, peer-reviewed open access journal which provides an advanced forum for studies related to genes, genetics and genomics. It publishes reviews, research articles, communications and technical notes. There is no restriction on the length of the papers and we encourage scientists to publish their results in as much detail as possible.