测序历史RNA:未实现的潜力,以增加对植物生命之树的理解。

IF 17.3 1区 生物学 Q1 PLANT SCIENCES Trends in Plant Science Pub Date : 2024-11-28 DOI:10.1016/j.tplants.2024.11.004
Alexa S Tyszka, Drew A Larson, Joseph F Walker
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引用次数: 0

摘要

最近的研究表明,转录组测序需要在超低温下保存组织是一种误解。在这里,我们概述了这种误解的潜在起源及其在已发表的植物转录组的地理分布中可能起的作用。我们通过提供转录组可以回答的关于塑造植物生命之树的力量的问题的概述,强调确保多样化采样的重要性。我们讨论如何扩大转录组测序,包括现有的标本将允许该领域的发展和更充分地利用生物收集。我们希望这篇文章能够鼓励“草药组学”研究的当前趋势,包括历史RNA的全转录组测序。
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Sequencing historical RNA: unrealized potential to increase understanding of the plant tree of life.

Recent studies have demonstrated that it is a misconception that transcriptome sequencing requires tissue preserved at ultracold temperatures. Here, we outline the potential origins of this misconception and its possible role in biasing the geographic distribution of published plant transcriptomes. We highlight the importance of ensuring diverse sampling by providing an overview of the questions that transcriptomes can answer about the forces shaping the plant tree of life. We discuss how broadening transcriptome sequencing to include existing specimens will allow the field to grow and more fully utilize biological collections. We hope this article encourages the expansion of the current trend in 'herbariomics' research to include whole-transcriptome sequencing of historical RNA.

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来源期刊
Trends in Plant Science
Trends in Plant Science 生物-植物科学
CiteScore
31.30
自引率
2.00%
发文量
196
审稿时长
6-12 weeks
期刊介绍: Trends in Plant Science is the primary monthly review journal in plant science, encompassing a wide range from molecular biology to ecology. It offers concise and accessible reviews and opinions on fundamental plant science topics, providing quick insights into current thinking and developments in plant biology. Geared towards researchers, students, and teachers, the articles are authoritative, authored by both established leaders in the field and emerging talents.
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