机器学习辅助离体共聚焦激光扫描显微镜检测基底细胞癌。

IF 3.5 4区 医学 Q1 DERMATOLOGY International Journal of Dermatology Pub Date : 2024-12-03 DOI:10.1111/ijd.17519
Pinar Avci, Marie C Düsedau, Víctor Padrón-Laso, Zan Jonke, Ramona Fenderle, Florian Neumeier, Ikenna U Ikeliani
{"title":"机器学习辅助离体共聚焦激光扫描显微镜检测基底细胞癌。","authors":"Pinar Avci, Marie C Düsedau, Víctor Padrón-Laso, Zan Jonke, Ramona Fenderle, Florian Neumeier, Ikenna U Ikeliani","doi":"10.1111/ijd.17519","DOIUrl":null,"url":null,"abstract":"<p><strong>Background: </strong>Ex vivo confocal laser scanning microscopy (EVCM) is an emerging imaging modality that enables near real-time histology of whole tissue samples. However, the adoption of EVCM into clinical routine is partly limited because the recognition of modality-specific diagnostic features requires specialized training. Therefore, we aimed to build a machine learning algorithm for the detection of basal cell carcinoma (BCC) in images acquired using EVCM and, in turn, facilitate the examiner's decision-making process.</p><p><strong>Methods: </strong>In this proof-of-concept study, histologically confirmed BCC fresh tissue samples were used to generate 50 EVCM images to train and assess a convolutional neural network architecture (MobileNet-V1) via tenfold cross-validation.</p><p><strong>Results: </strong>Overall sensitivity and specificity of the model for detecting BCC and tumor-free regions on EVCM images compared to expert evaluation were 0.88 and 0.85, respectively. We constructed receiver operator characteristic and precision-recall curves from the aggregated tenfold cross-validation to assess the model's performance; the area under the curve was 0.94 and 0.87, respectively. Subsequently, the performance of one of the selected machine learning models was assessed with 19 new EVCM images of tumor-containing (n = 10) and 9 tumor-free (n = 9) skin tissue. A sensitivity of 0.83 and a specificity of 0.92 were achieved for the BCC group. The specificity for the tumor-free control group was 0.98.</p><p><strong>Conclusion: </strong>The deep learning model developed in our study holds the potential to assist the diagnostic decision-making process and diminish the training time of novices by depicting tumor-positive regions in EVCM images.</p>","PeriodicalId":13950,"journal":{"name":"International Journal of Dermatology","volume":" ","pages":""},"PeriodicalIF":3.5000,"publicationDate":"2024-12-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Detection of basal cell carcinoma by machine learning-assisted ex vivo confocal laser scanning microscopy.\",\"authors\":\"Pinar Avci, Marie C Düsedau, Víctor Padrón-Laso, Zan Jonke, Ramona Fenderle, Florian Neumeier, Ikenna U Ikeliani\",\"doi\":\"10.1111/ijd.17519\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Background: </strong>Ex vivo confocal laser scanning microscopy (EVCM) is an emerging imaging modality that enables near real-time histology of whole tissue samples. However, the adoption of EVCM into clinical routine is partly limited because the recognition of modality-specific diagnostic features requires specialized training. Therefore, we aimed to build a machine learning algorithm for the detection of basal cell carcinoma (BCC) in images acquired using EVCM and, in turn, facilitate the examiner's decision-making process.</p><p><strong>Methods: </strong>In this proof-of-concept study, histologically confirmed BCC fresh tissue samples were used to generate 50 EVCM images to train and assess a convolutional neural network architecture (MobileNet-V1) via tenfold cross-validation.</p><p><strong>Results: </strong>Overall sensitivity and specificity of the model for detecting BCC and tumor-free regions on EVCM images compared to expert evaluation were 0.88 and 0.85, respectively. We constructed receiver operator characteristic and precision-recall curves from the aggregated tenfold cross-validation to assess the model's performance; the area under the curve was 0.94 and 0.87, respectively. Subsequently, the performance of one of the selected machine learning models was assessed with 19 new EVCM images of tumor-containing (n = 10) and 9 tumor-free (n = 9) skin tissue. A sensitivity of 0.83 and a specificity of 0.92 were achieved for the BCC group. The specificity for the tumor-free control group was 0.98.</p><p><strong>Conclusion: </strong>The deep learning model developed in our study holds the potential to assist the diagnostic decision-making process and diminish the training time of novices by depicting tumor-positive regions in EVCM images.</p>\",\"PeriodicalId\":13950,\"journal\":{\"name\":\"International Journal of Dermatology\",\"volume\":\" \",\"pages\":\"\"},\"PeriodicalIF\":3.5000,\"publicationDate\":\"2024-12-03\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"International Journal of Dermatology\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://doi.org/10.1111/ijd.17519\",\"RegionNum\":4,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"DERMATOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"International Journal of Dermatology","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1111/ijd.17519","RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"DERMATOLOGY","Score":null,"Total":0}
引用次数: 0

摘要

背景:离体共聚焦激光扫描显微镜(EVCM)是一种新兴的成像方式,可以近实时地观察整个组织样本的组织学。然而,在临床常规中采用EVCM在一定程度上受到限制,因为对特定模式诊断特征的识别需要专门的培训。因此,我们的目标是建立一种机器学习算法,用于在使用EVCM获得的图像中检测基底细胞癌(BCC),从而促进审查员的决策过程。方法:在这项概念验证研究中,组织学证实的BCC新鲜组织样本被用来生成50张EVCM图像,通过十倍交叉验证来训练和评估卷积神经网络架构(MobileNet-V1)。结果:与专家评价相比,该模型在EVCM图像上检测BCC和无瘤区域的总体敏感性和特异性分别为0.88和0.85。我们从聚合的十倍交叉验证中构建了接收者算子特征和精确召回率曲线来评估模型的性能;曲线下面积分别为0.94和0.87。随后,使用19张含肿瘤(n = 10)和9张无肿瘤(n = 9)皮肤组织的EVCM图像评估所选机器学习模型之一的性能。BCC组的敏感性为0.83,特异性为0.92。无肿瘤对照组特异性为0.98。结论:在我们的研究中开发的深度学习模型具有通过描绘EVCM图像中的肿瘤阳性区域来辅助诊断决策过程和减少新手训练时间的潜力。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Detection of basal cell carcinoma by machine learning-assisted ex vivo confocal laser scanning microscopy.

Background: Ex vivo confocal laser scanning microscopy (EVCM) is an emerging imaging modality that enables near real-time histology of whole tissue samples. However, the adoption of EVCM into clinical routine is partly limited because the recognition of modality-specific diagnostic features requires specialized training. Therefore, we aimed to build a machine learning algorithm for the detection of basal cell carcinoma (BCC) in images acquired using EVCM and, in turn, facilitate the examiner's decision-making process.

Methods: In this proof-of-concept study, histologically confirmed BCC fresh tissue samples were used to generate 50 EVCM images to train and assess a convolutional neural network architecture (MobileNet-V1) via tenfold cross-validation.

Results: Overall sensitivity and specificity of the model for detecting BCC and tumor-free regions on EVCM images compared to expert evaluation were 0.88 and 0.85, respectively. We constructed receiver operator characteristic and precision-recall curves from the aggregated tenfold cross-validation to assess the model's performance; the area under the curve was 0.94 and 0.87, respectively. Subsequently, the performance of one of the selected machine learning models was assessed with 19 new EVCM images of tumor-containing (n = 10) and 9 tumor-free (n = 9) skin tissue. A sensitivity of 0.83 and a specificity of 0.92 were achieved for the BCC group. The specificity for the tumor-free control group was 0.98.

Conclusion: The deep learning model developed in our study holds the potential to assist the diagnostic decision-making process and diminish the training time of novices by depicting tumor-positive regions in EVCM images.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
CiteScore
4.70
自引率
2.80%
发文量
476
审稿时长
3 months
期刊介绍: Published monthly, the International Journal of Dermatology is specifically designed to provide dermatologists around the world with a regular, up-to-date source of information on all aspects of the diagnosis and management of skin diseases. Accepted articles regularly cover clinical trials; education; morphology; pharmacology and therapeutics; case reports, and reviews. Additional features include tropical medical reports, news, correspondence, proceedings and transactions, and education. The International Journal of Dermatology is guided by a distinguished, international editorial board and emphasizes a global approach to continuing medical education for physicians and other providers of health care with a specific interest in problems relating to the skin.
期刊最新文献
Issue Information Inflammatory Nail Disorders in Skin of Color: A Systematic Review of Clinical and Onychoscopic Manifestations. The Dermatology of Recreational Scuba Diving: A Narrative Review. A Case of Successful Use of Higher Dose Dupilumab in the Treatment of Pemphigoid Nodularis Combined With Parkinson's Disease. Assessing the Health Implications of UV/LED Nail Lamp Radiation Exposure During Manicure and Pedicure Procedures: A Scoping Review.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1