{"title":"萱草品种小橙灯2019叶绿体全基因组特征及分析。","authors":"Xiaofei Zhang, Jiaming Yang, Xuwen Shang, Shengyue Chai, Lanling Jiang, Xiaolei Hou, Zhenting Wang, Lixin Lang","doi":"10.1080/23802359.2024.2435904","DOIUrl":null,"url":null,"abstract":"<p><p><i>Hemerocallis</i> cultivar Small orange lamp is a hybrid variety. Its whole chloroplast genome was 156,053 bp in size, consisting of 135 genes in total, including 89 mRNA genes, 38 tRNA genes, and 8 rRNA genes. The chloroplast genome contained a large single copy region (LSC 84,805 bp), a small single copy region (SSC 18,510 bp) and a pair of inverted repeats (IRa and IRb 26,369 bp). The overall GC content was 37.34%. Phylogenetic analysis showed that <i>Hemerocallis lilioasphodelus</i> and <i>H</i>. cultivar Small orange lamp are most closely related. This will provide valuable reference for further research on the genetic information of plants in the <i>Hemerocallis.</i></p>","PeriodicalId":18647,"journal":{"name":"Mitochondrial DNA. Part B, Resources","volume":"9 12","pages":"1632-1635"},"PeriodicalIF":0.5000,"publicationDate":"2024-12-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11613412/pdf/","citationCount":"0","resultStr":"{\"title\":\"The characteristics and analysis of the complete chloroplast genome of <i>Hemerocallis</i> cultivar Small orange lamp 2019 (Asphodelaceae).\",\"authors\":\"Xiaofei Zhang, Jiaming Yang, Xuwen Shang, Shengyue Chai, Lanling Jiang, Xiaolei Hou, Zhenting Wang, Lixin Lang\",\"doi\":\"10.1080/23802359.2024.2435904\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p><i>Hemerocallis</i> cultivar Small orange lamp is a hybrid variety. Its whole chloroplast genome was 156,053 bp in size, consisting of 135 genes in total, including 89 mRNA genes, 38 tRNA genes, and 8 rRNA genes. The chloroplast genome contained a large single copy region (LSC 84,805 bp), a small single copy region (SSC 18,510 bp) and a pair of inverted repeats (IRa and IRb 26,369 bp). The overall GC content was 37.34%. Phylogenetic analysis showed that <i>Hemerocallis lilioasphodelus</i> and <i>H</i>. cultivar Small orange lamp are most closely related. This will provide valuable reference for further research on the genetic information of plants in the <i>Hemerocallis.</i></p>\",\"PeriodicalId\":18647,\"journal\":{\"name\":\"Mitochondrial DNA. Part B, Resources\",\"volume\":\"9 12\",\"pages\":\"1632-1635\"},\"PeriodicalIF\":0.5000,\"publicationDate\":\"2024-12-02\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11613412/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Mitochondrial DNA. Part B, Resources\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1080/23802359.2024.2435904\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/1/1 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"Q4\",\"JCRName\":\"GENETICS & HEREDITY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Mitochondrial DNA. Part B, Resources","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1080/23802359.2024.2435904","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/1/1 0:00:00","PubModel":"eCollection","JCR":"Q4","JCRName":"GENETICS & HEREDITY","Score":null,"Total":0}
The characteristics and analysis of the complete chloroplast genome of Hemerocallis cultivar Small orange lamp 2019 (Asphodelaceae).
Hemerocallis cultivar Small orange lamp is a hybrid variety. Its whole chloroplast genome was 156,053 bp in size, consisting of 135 genes in total, including 89 mRNA genes, 38 tRNA genes, and 8 rRNA genes. The chloroplast genome contained a large single copy region (LSC 84,805 bp), a small single copy region (SSC 18,510 bp) and a pair of inverted repeats (IRa and IRb 26,369 bp). The overall GC content was 37.34%. Phylogenetic analysis showed that Hemerocallis lilioasphodelus and H. cultivar Small orange lamp are most closely related. This will provide valuable reference for further research on the genetic information of plants in the Hemerocallis.
期刊介绍：
This open access journal publishes high-quality and concise research articles reporting the sequence of full mitochondrial genomes, and short communications focusing on the physical, chemical, and biochemical aspects of mtDNA and proteins involved in mtDNA metabolism and interactions.
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