通过孟德尔随机化分析确定糖尿病多发性神经病变的潜在药物靶点。

IF 6.1 2区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Cell and Bioscience Pub Date : 2024-12-05 DOI:10.1186/s13578-024-01323-4
Xiaokun Chen, Guohua Jiang, Tianjing Zhao, Nian Sun, Shanshan Liu, Hao Guo, Canjun Zeng, Yijun Liu
{"title":"通过孟德尔随机化分析确定糖尿病多发性神经病变的潜在药物靶点。","authors":"Xiaokun Chen, Guohua Jiang, Tianjing Zhao, Nian Sun, Shanshan Liu, Hao Guo, Canjun Zeng, Yijun Liu","doi":"10.1186/s13578-024-01323-4","DOIUrl":null,"url":null,"abstract":"<p><strong>Background: </strong>Diabetic polyneuropathy (DPN) is a common diabetes complication with limited treatment options. We aimed to identify circulating plasma proteins as potential therapeutic targets for DPN using Mendelian Randomization (MR).</p><p><strong>Methods: </strong>The protein quantitative trait loci (pQTLs) utilized in this study were derived from seven previously published genome-wide association studies (GWASs) on plasma proteomics. The DPN data were obtained from the IEU OpenGWAS project. This study employed two-sample MR using MR-Egger and inverse-variance weighted methods to evaluate the causal relationship between plasma proteins and DPN risk, with Cochran's Q test, and I<sup>2</sup> statistics, among other methods, used to validate the robustness of the results.</p><p><strong>Results: </strong>Using cis-pQTLs as genetic instruments, we identified 62 proteins associated with DPN, with 33 increasing the risk and 29 decreasing the risk of DPN. Using cis-pQTLs + trans-pQTLs, we identified 116 proteins associated with DPN, with 44 increasing the risk and 72 decreasing the risk of DPN. Steiger directionality tests indicated that the causal relationships between circulating plasma proteins and DPN were consistent with expected directions.</p><p><strong>Conclusion: </strong>This study identified 96 circulating plasma proteins with genetically determined levels that affect the risk of DPN, providing new potential targets for DPN drug development, particularly ITM2B, CREG1, CD14, and PLXNA4.</p>","PeriodicalId":49095,"journal":{"name":"Cell and Bioscience","volume":"14 1","pages":"147"},"PeriodicalIF":6.1000,"publicationDate":"2024-12-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11619124/pdf/","citationCount":"0","resultStr":"{\"title\":\"Identification of potential drug targets for diabetic polyneuropathy through Mendelian randomization analysis.\",\"authors\":\"Xiaokun Chen, Guohua Jiang, Tianjing Zhao, Nian Sun, Shanshan Liu, Hao Guo, Canjun Zeng, Yijun Liu\",\"doi\":\"10.1186/s13578-024-01323-4\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Background: </strong>Diabetic polyneuropathy (DPN) is a common diabetes complication with limited treatment options. We aimed to identify circulating plasma proteins as potential therapeutic targets for DPN using Mendelian Randomization (MR).</p><p><strong>Methods: </strong>The protein quantitative trait loci (pQTLs) utilized in this study were derived from seven previously published genome-wide association studies (GWASs) on plasma proteomics. The DPN data were obtained from the IEU OpenGWAS project. This study employed two-sample MR using MR-Egger and inverse-variance weighted methods to evaluate the causal relationship between plasma proteins and DPN risk, with Cochran's Q test, and I<sup>2</sup> statistics, among other methods, used to validate the robustness of the results.</p><p><strong>Results: </strong>Using cis-pQTLs as genetic instruments, we identified 62 proteins associated with DPN, with 33 increasing the risk and 29 decreasing the risk of DPN. Using cis-pQTLs + trans-pQTLs, we identified 116 proteins associated with DPN, with 44 increasing the risk and 72 decreasing the risk of DPN. Steiger directionality tests indicated that the causal relationships between circulating plasma proteins and DPN were consistent with expected directions.</p><p><strong>Conclusion: </strong>This study identified 96 circulating plasma proteins with genetically determined levels that affect the risk of DPN, providing new potential targets for DPN drug development, particularly ITM2B, CREG1, CD14, and PLXNA4.</p>\",\"PeriodicalId\":49095,\"journal\":{\"name\":\"Cell and Bioscience\",\"volume\":\"14 1\",\"pages\":\"147\"},\"PeriodicalIF\":6.1000,\"publicationDate\":\"2024-12-05\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11619124/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Cell and Bioscience\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1186/s13578-024-01323-4\",\"RegionNum\":2,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"BIOCHEMISTRY & MOLECULAR BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Cell and Bioscience","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1186/s13578-024-01323-4","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
引用次数: 0

摘要

背景:糖尿病多发神经病变(DPN)是一种常见的糖尿病并发症,治疗方案有限。我们的目的是利用孟德尔随机化(MR)确定循环血浆蛋白作为DPN的潜在治疗靶点。方法:本研究使用的蛋白数量性状位点(pQTLs)来源于7个已发表的血浆蛋白质组学全基因组关联研究(GWASs)。DPN数据来自IEU OpenGWAS项目。本研究采用双样本MR,采用MR- egger和反方差加权方法来评估血浆蛋白与DPN风险之间的因果关系,并使用Cochran's Q检验和I2统计等方法来验证结果的稳健性。结果:使用顺式pqtl作为遗传工具,我们鉴定出62个与DPN相关的蛋白,其中33个增加DPN的风险,29个降低DPN的风险。使用顺式pqtls +反式pqtls,我们鉴定了116个与DPN相关的蛋白,其中44个增加DPN的风险,72个降低DPN的风险。Steiger方向性试验表明,循环血浆蛋白与DPN之间的因果关系与预期方向一致。结论:本研究确定了96种影响DPN风险的遗传水平的循环血浆蛋白,为DPN药物开发提供了新的潜在靶点,特别是ITM2B、CREG1、CD14和PLXNA4。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Identification of potential drug targets for diabetic polyneuropathy through Mendelian randomization analysis.

Background: Diabetic polyneuropathy (DPN) is a common diabetes complication with limited treatment options. We aimed to identify circulating plasma proteins as potential therapeutic targets for DPN using Mendelian Randomization (MR).

Methods: The protein quantitative trait loci (pQTLs) utilized in this study were derived from seven previously published genome-wide association studies (GWASs) on plasma proteomics. The DPN data were obtained from the IEU OpenGWAS project. This study employed two-sample MR using MR-Egger and inverse-variance weighted methods to evaluate the causal relationship between plasma proteins and DPN risk, with Cochran's Q test, and I2 statistics, among other methods, used to validate the robustness of the results.

Results: Using cis-pQTLs as genetic instruments, we identified 62 proteins associated with DPN, with 33 increasing the risk and 29 decreasing the risk of DPN. Using cis-pQTLs + trans-pQTLs, we identified 116 proteins associated with DPN, with 44 increasing the risk and 72 decreasing the risk of DPN. Steiger directionality tests indicated that the causal relationships between circulating plasma proteins and DPN were consistent with expected directions.

Conclusion: This study identified 96 circulating plasma proteins with genetically determined levels that affect the risk of DPN, providing new potential targets for DPN drug development, particularly ITM2B, CREG1, CD14, and PLXNA4.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Cell and Bioscience
Cell and Bioscience BIOCHEMISTRY & MOLECULAR BIOLOGY-
CiteScore
10.70
自引率
0.00%
发文量
187
审稿时长
>12 weeks
期刊介绍: Cell and Bioscience, the official journal of the Society of Chinese Bioscientists in America, is an open access, peer-reviewed journal that encompasses all areas of life science research.
期刊最新文献
Comparison of characteristics and immune responses between paired human nasal and bronchial epithelial organoids. Comprehensive landscape and oncogenic role of extrachromosomal circular DNA in malignant biliary strictures. TOPBP1 as a potential predictive biomarker for enhanced combinatorial efficacy of olaparib and AZD6738 in PDAC. Plectin, a novel regulator in migration, invasion and adhesion of ovarian cancer. Epsin3 promotes non-small cell lung cancer progression via modulating EGFR stability.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1