{"title":"韩国石斛属（腹足目，海颌目，石斛科）线粒体全基因组。","authors":"Seunghyun Lee, Seongjun Bae","doi":"10.1080/23802359.2024.2435915","DOIUrl":null,"url":null,"abstract":"<p><p>The complete mitochondrial genome sequence of <i>Dendrodoris krusensternii</i> (J. E. Gray, 1850) was determined using next-generation sequencing. The complete mitochondrial genome of <i>D. krusensternii</i> is 14,361 bp long, comprising 13 genes, including 13 protein-coding genes (PCGs), 22 transfer RNAs, and two ribosomal RNAs. The nucleotide composition was estimated: 28.7% A, 14.8% C, 19.6% G, and 36.9% T. Phylogenetic analysis was performed using the maximum likelihood method (including 13 PCGs). <i>D. krusensternii</i> is related to the Phyllidiidae (superfamily Phyllidioidea), suggesting a distinct phylogenetic placement within Nudibranchia. This study represents a genomic resource, contributing to molecular studies on the evolution of the Dendrodorididae.</p>","PeriodicalId":18647,"journal":{"name":"Mitochondrial DNA. Part B, Resources","volume":"9 12","pages":"1636-1641"},"PeriodicalIF":0.5000,"publicationDate":"2024-12-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11622375/pdf/","citationCount":"0","resultStr":"{\"title\":\"The complete mitochondrial genome of <i>Dendrodoris krusensternii</i> (Gastropoda, Nudibranchia, Dendrodorididae) from South Korea.\",\"authors\":\"Seunghyun Lee, Seongjun Bae\",\"doi\":\"10.1080/23802359.2024.2435915\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>The complete mitochondrial genome sequence of <i>Dendrodoris krusensternii</i> (J. E. Gray, 1850) was determined using next-generation sequencing. The complete mitochondrial genome of <i>D. krusensternii</i> is 14,361 bp long, comprising 13 genes, including 13 protein-coding genes (PCGs), 22 transfer RNAs, and two ribosomal RNAs. The nucleotide composition was estimated: 28.7% A, 14.8% C, 19.6% G, and 36.9% T. Phylogenetic analysis was performed using the maximum likelihood method (including 13 PCGs). <i>D. krusensternii</i> is related to the Phyllidiidae (superfamily Phyllidioidea), suggesting a distinct phylogenetic placement within Nudibranchia. This study represents a genomic resource, contributing to molecular studies on the evolution of the Dendrodorididae.</p>\",\"PeriodicalId\":18647,\"journal\":{\"name\":\"Mitochondrial DNA. Part B, Resources\",\"volume\":\"9 12\",\"pages\":\"1636-1641\"},\"PeriodicalIF\":0.5000,\"publicationDate\":\"2024-12-05\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11622375/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Mitochondrial DNA. Part B, Resources\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1080/23802359.2024.2435915\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/1/1 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"Q4\",\"JCRName\":\"GENETICS & HEREDITY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Mitochondrial DNA. Part B, Resources","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1080/23802359.2024.2435915","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/1/1 0:00:00","PubModel":"eCollection","JCR":"Q4","JCRName":"GENETICS & HEREDITY","Score":null,"Total":0}
引用次数: 0
摘要
采用新一代测序技术测定了krusensternii （J. E. Gray, 1850）的线粒体全基因组序列。krusensternii线粒体全基因组全长14361 bp，包含13个基因，包括13个蛋白质编码基因（PCGs）、22个转移rna和2个核糖体rna。估计核苷酸组成为：28.7% A, 14.8% C， 19.6% G和36.9% t。采用最大似然法进行系统发育分析（包括13个PCGs）。D. krusensternii与phyllididae （phyllidio总科）有亲缘关系，提示在裸鳃亚纲中有一个明显的系统发育位置。本研究为树孢子科进化的分子研究提供了基因组资源。
The complete mitochondrial genome of Dendrodoris krusensternii (Gastropoda, Nudibranchia, Dendrodorididae) from South Korea.
The complete mitochondrial genome sequence of Dendrodoris krusensternii (J. E. Gray, 1850) was determined using next-generation sequencing. The complete mitochondrial genome of D. krusensternii is 14,361 bp long, comprising 13 genes, including 13 protein-coding genes (PCGs), 22 transfer RNAs, and two ribosomal RNAs. The nucleotide composition was estimated: 28.7% A, 14.8% C, 19.6% G, and 36.9% T. Phylogenetic analysis was performed using the maximum likelihood method (including 13 PCGs). D. krusensternii is related to the Phyllidiidae (superfamily Phyllidioidea), suggesting a distinct phylogenetic placement within Nudibranchia. This study represents a genomic resource, contributing to molecular studies on the evolution of the Dendrodorididae.
期刊介绍：
This open access journal publishes high-quality and concise research articles reporting the sequence of full mitochondrial genomes, and short communications focusing on the physical, chemical, and biochemical aspects of mtDNA and proteins involved in mtDNA metabolism and interactions.
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