Victoire Michal, Alexandra M Schmidt, Laís Picinini Freitas, Oswaldo Gonçalves Cruz
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We assume a scale mixture structure wherein the variance of the latent process changes across areas and allows for outlier identification. We propose two prior specifications for this scale mixture parameter. These are compared through various simulation studies and in the analysis of Zika cases from the first (2015-2016) epidemic in Rio de Janeiro city, Brazil. The simulation studies show that the proposed model always performs at least as well as an alternative available in the literature, and often better, both in terms of widely applicable information criterion, mean squared error and of outlier identification. In particular, the proposed parametrisations are more efficient, in terms of outlier detection, when outliers are neighbours. Our analysis of Zika cases finds 23 out of 160 districts of Rio as potential outliers, after accounting for the socio-development index. 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引用次数: 0
摘要
在疾病制图中,一种疾病的相对风险通常在一个感兴趣的区域内的不同区域进行估计。一个地区的病例数通常假定遵循泊松分布,其平均值分解为偏移量与疾病相对风险对数之间的乘积。日志风险可以写成固定效应和潜在随机效应的总和。改进的besag - york - molli (BYM2)模型将每个潜在效应分解为独立效应和空间效应的加权和。在考虑了固定效应之后,我们在BYM2模型的基础上考虑了重尾潜在效应,并适应了潜在的外围风险。我们假设一个规模混合结构,其中潜在过程的方差在各个区域变化,并允许异常值识别。我们提出了这一尺度混合参数的两个先验规范。通过各种模拟研究和对巴西里约热内卢市第一次(2015-2016年)流行的寨卡病例的分析,对这些进行了比较。仿真研究表明,所提出的模型在广泛适用的信息准则、均方误差和离群值识别方面的表现至少与文献中可用的替代模型一样好,而且往往更好。特别是,当离群值相邻时,所提出的参数化在离群值检测方面更有效。我们对寨卡病例的分析发现,在考虑了社会发展指数之后,巴西160个地区中有23个地区可能是异常值。我们提出的模型可能有助于确定干预措施的优先次序,并确定病例记录中的潜在问题。
A Bayesian hierarchical model for disease mapping that accounts for scaling and heavy-tailed latent effects.
In disease mapping, the relative risk of a disease is commonly estimated across different areas within a region of interest. The number of cases in an area is often assumed to follow a Poisson distribution whose mean is decomposed as the product between an offset and the logarithm of the disease's relative risk. The log risk may be written as the sum of fixed effects and latent random effects. A modified Besag-York-Mollié (BYM2) model decomposes each latent effect into a weighted sum of independent and spatial effects. We build on the BYM2 model to allow for heavy-tailed latent effects and accommodate potentially outlying risks, after accounting for the fixed effects. We assume a scale mixture structure wherein the variance of the latent process changes across areas and allows for outlier identification. We propose two prior specifications for this scale mixture parameter. These are compared through various simulation studies and in the analysis of Zika cases from the first (2015-2016) epidemic in Rio de Janeiro city, Brazil. The simulation studies show that the proposed model always performs at least as well as an alternative available in the literature, and often better, both in terms of widely applicable information criterion, mean squared error and of outlier identification. In particular, the proposed parametrisations are more efficient, in terms of outlier detection, when outliers are neighbours. Our analysis of Zika cases finds 23 out of 160 districts of Rio as potential outliers, after accounting for the socio-development index. Our proposed model may help prioritise interventions and identify potential issues in the recording of cases.
期刊介绍:
Statistical Methods in Medical Research is a peer reviewed scholarly journal and is the leading vehicle for articles in all the main areas of medical statistics and an essential reference for all medical statisticians. This unique journal is devoted solely to statistics and medicine and aims to keep professionals abreast of the many powerful statistical techniques now available to the medical profession. This journal is a member of the Committee on Publication Ethics (COPE)