亚马逊低地厄瓜多尔anurans中树突壶菌(Batrachochytrium dendrobatitis)全系的检测。

IF 1.1 4区 农林科学 Q3 FISHERIES Diseases of aquatic organisms Pub Date : 2024-12-12 DOI:10.3354/dao03830
Utpal Smart, Shawn F McCracken, Rebecca M Brunner, Clarissa Rivera, David Rodriguez
{"title":"亚马逊低地厄瓜多尔anurans中树突壶菌(Batrachochytrium dendrobatitis)全系的检测。","authors":"Utpal Smart, Shawn F McCracken, Rebecca M Brunner, Clarissa Rivera, David Rodriguez","doi":"10.3354/dao03830","DOIUrl":null,"url":null,"abstract":"<p><p>Considerable attention has been directed to studying the infection dynamics of the fungal pathogen Batrachochytrium dendrobatidis (Bd) affecting amphibians in the high elevations of the Neotropics. However, lowland forests of the same realm remain comparatively understudied in this context. Herein, we attempt to bridge this gap by measuring the prevalence of Bd via quantitative polymerase chain reaction (qPCR) in several anuran taxa inhabiting the Amazonian lowlands in the northeast of Ecuador. To this end, we sampled 207 anurans from 10 different families, 25 different genera, and 55 distinct host species originally collected in 2008. Taxonomy (at the family level), morphology (i.e. weight and snout-vent length), and life-long aquatic dependency of hosts (i.e. aquatic index) were also compiled to serve as potential predictors of Bd infection status. Our findings revealed a relatively high Bd prevalence of 58%, with 88% of sampled anuran families testing positive for the fungus at varying proportions. Model selection involving fitting and testing several different linear models, including mixed linear models, revealed a significant negative relationship between host weight and Bd infection status (p < 0.01). However, no significant associations were observed between taxonomy, aquatic dependency, snout-vent length, and Bd infections. In addition, we only detected the global panzootic lineage of Bd (Bd-GPL) and not the Bd-Asia-2/Bd-Brazil lineage via qPCR single nucleotide polymorphism (SNP) genotyping. Our findings contribute to the understanding of Bd dynamics in the Neotropical lowlands and emphasize the need for future research on the ecological factors influencing Bd in the Amazon and their implications for amphibian conservation.</p>","PeriodicalId":11252,"journal":{"name":"Diseases of aquatic organisms","volume":"160 ","pages":"115-125"},"PeriodicalIF":1.1000,"publicationDate":"2024-12-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Detection of the Batrachochytrium dendrobatidis global panzootic lineage in Ecuadorian anurans of the Amazonian lowlands.\",\"authors\":\"Utpal Smart, Shawn F McCracken, Rebecca M Brunner, Clarissa Rivera, David Rodriguez\",\"doi\":\"10.3354/dao03830\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Considerable attention has been directed to studying the infection dynamics of the fungal pathogen Batrachochytrium dendrobatidis (Bd) affecting amphibians in the high elevations of the Neotropics. However, lowland forests of the same realm remain comparatively understudied in this context. Herein, we attempt to bridge this gap by measuring the prevalence of Bd via quantitative polymerase chain reaction (qPCR) in several anuran taxa inhabiting the Amazonian lowlands in the northeast of Ecuador. To this end, we sampled 207 anurans from 10 different families, 25 different genera, and 55 distinct host species originally collected in 2008. Taxonomy (at the family level), morphology (i.e. weight and snout-vent length), and life-long aquatic dependency of hosts (i.e. aquatic index) were also compiled to serve as potential predictors of Bd infection status. Our findings revealed a relatively high Bd prevalence of 58%, with 88% of sampled anuran families testing positive for the fungus at varying proportions. Model selection involving fitting and testing several different linear models, including mixed linear models, revealed a significant negative relationship between host weight and Bd infection status (p < 0.01). However, no significant associations were observed between taxonomy, aquatic dependency, snout-vent length, and Bd infections. In addition, we only detected the global panzootic lineage of Bd (Bd-GPL) and not the Bd-Asia-2/Bd-Brazil lineage via qPCR single nucleotide polymorphism (SNP) genotyping. Our findings contribute to the understanding of Bd dynamics in the Neotropical lowlands and emphasize the need for future research on the ecological factors influencing Bd in the Amazon and their implications for amphibian conservation.</p>\",\"PeriodicalId\":11252,\"journal\":{\"name\":\"Diseases of aquatic organisms\",\"volume\":\"160 \",\"pages\":\"115-125\"},\"PeriodicalIF\":1.1000,\"publicationDate\":\"2024-12-12\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Diseases of aquatic organisms\",\"FirstCategoryId\":\"97\",\"ListUrlMain\":\"https://doi.org/10.3354/dao03830\",\"RegionNum\":4,\"RegionCategory\":\"农林科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"FISHERIES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Diseases of aquatic organisms","FirstCategoryId":"97","ListUrlMain":"https://doi.org/10.3354/dao03830","RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"FISHERIES","Score":null,"Total":0}
引用次数: 0

摘要

近年来,人们对新热带高海拔地区两栖动物的真菌病原菌水蛭壶菌(Batrachochytrium dendroatidis, Bd)的感染动力学进行了研究。然而,同一领域的低地森林在这方面的研究相对较少。在此,我们试图通过定量聚合酶链反应(qPCR)测量居住在厄瓜多尔东北部亚马逊低地的几个anuran类群的Bd患病率来弥补这一差距。为此,我们从2008年收集的10个不同科、25个不同属和55个不同寄主物种中取样了207只无尾猿。分类(在科水平上)、形态(即体重和口鼻长度)和宿主对水生生物的终生依赖(即水生指数)也被编制为Bd感染状况的潜在预测指标。我们的研究结果显示,相对较高的Bd患病率为58%,其中88%的取样anuran家庭在不同比例的真菌检测中呈阳性。模型选择涉及拟合和检验几种不同的线性模型,包括混合线性模型,结果显示宿主体重与Bd感染状态呈显著负相关(p < 0.01)。然而,在分类、水生依赖、口鼻长度和Bd感染之间没有观察到显著的关联。此外,我们仅通过qPCR单核苷酸多态性(SNP)基因分型检测到Bd (Bd- gpl)的全球流行病谱系,而没有检测到Bd-亚洲-2/Bd-巴西谱系。我们的研究结果有助于了解新热带低地的生物多样性动态,并强调了未来亚马逊地区影响生物多样性的生态因素及其对两栖动物保护的意义。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Detection of the Batrachochytrium dendrobatidis global panzootic lineage in Ecuadorian anurans of the Amazonian lowlands.

Considerable attention has been directed to studying the infection dynamics of the fungal pathogen Batrachochytrium dendrobatidis (Bd) affecting amphibians in the high elevations of the Neotropics. However, lowland forests of the same realm remain comparatively understudied in this context. Herein, we attempt to bridge this gap by measuring the prevalence of Bd via quantitative polymerase chain reaction (qPCR) in several anuran taxa inhabiting the Amazonian lowlands in the northeast of Ecuador. To this end, we sampled 207 anurans from 10 different families, 25 different genera, and 55 distinct host species originally collected in 2008. Taxonomy (at the family level), morphology (i.e. weight and snout-vent length), and life-long aquatic dependency of hosts (i.e. aquatic index) were also compiled to serve as potential predictors of Bd infection status. Our findings revealed a relatively high Bd prevalence of 58%, with 88% of sampled anuran families testing positive for the fungus at varying proportions. Model selection involving fitting and testing several different linear models, including mixed linear models, revealed a significant negative relationship between host weight and Bd infection status (p < 0.01). However, no significant associations were observed between taxonomy, aquatic dependency, snout-vent length, and Bd infections. In addition, we only detected the global panzootic lineage of Bd (Bd-GPL) and not the Bd-Asia-2/Bd-Brazil lineage via qPCR single nucleotide polymorphism (SNP) genotyping. Our findings contribute to the understanding of Bd dynamics in the Neotropical lowlands and emphasize the need for future research on the ecological factors influencing Bd in the Amazon and their implications for amphibian conservation.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Diseases of aquatic organisms
Diseases of aquatic organisms 农林科学-兽医学
CiteScore
3.10
自引率
0.00%
发文量
53
审稿时长
8-16 weeks
期刊介绍: DAO publishes Research Articles, Reviews, and Notes, as well as Comments/Reply Comments (for details see DAO 48:161), Theme Sections and Opinion Pieces. For details consult the Guidelines for Authors. Papers may cover all forms of life - animals, plants and microorganisms - in marine, limnetic and brackish habitats. DAO''s scope includes any research focusing on diseases in aquatic organisms, specifically: -Diseases caused by coexisting organisms, e.g. viruses, bacteria, fungi, protistans, metazoans; characterization of pathogens -Diseases caused by abiotic factors (critical intensities of environmental properties, including pollution)- Diseases due to internal circumstances (innate, idiopathic, genetic)- Diseases due to proliferative disorders (neoplasms)- Disease diagnosis, treatment and prevention- Molecular aspects of diseases- Nutritional disorders- Stress and physical injuries- Epidemiology/epizootiology- Parasitology- Toxicology- Diseases of aquatic organisms affecting human health and well-being (with the focus on the aquatic organism)- Diseases as indicators of humanity''s detrimental impact on nature- Genomics, proteomics and metabolomics of disease- Immunology and disease prevention- Animal welfare- Zoonosis
期刊最新文献
Effects of the 2022 Oder River environmental disaster on fish gill structure. Development of colloidal gold immunochromatographic strip for rapid detection of cyvirus cyprinidallo 2. Harnessing the immunomodulatory potential of ashwagandha (Withania somnifera) against epizootic ulcerative syndrome: a sustainable approach for hill aquaculture. Acute mortality event in false pilchards Harengula clupeola after salinomycin and amprolium treatment for myxozoan (Enteromyxum leei) infection. Epidemiological cut-off values for Vibrio parahaemolyticus calculated from minimal inhibitory concentration data generated at 35 and 28°C.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1