{"title":"Rhodococcus rhodochrous IITR131降解聚对苯二甲酸乙二醇酯的生化和分子机制。","authors":"Pallavi Srivastava, Srikrishna Subramanian, Natesan Manickam","doi":"10.1093/jambio/lxae312","DOIUrl":null,"url":null,"abstract":"<p><strong>Aims: </strong>To isolate polyethylene terephthalate (PET)-degrading bacteria and elucidate the underlying mechanisms of PET biodegradation through biochemical and genome analysis.</p><p><strong>Methods and results: </strong>Rhodococcus rhodochrous IITR131 was found to degrade PET. Strain IITR131 genome revealed metabolic versatility of the bacterium and had the ability to form biofilm on PET sheet, resulting in the cracks, abrasions, and degradation. IITR131 showed a reduction of 19.7%, exhibiting a half-life of 189.9 d of 0.1 mm PET film in 60 d and formed metabolites bis(2-hydroxyethyl) terephthalate (BHET), terephthalic acid (TPA), and benzoic acid (BA). The draft genome of 5.9 Mb of IITR131 revealed that this bacterium has plethora of genes such as terephthalate 1, 2 dioxygenase, carboxylesterase that together constituted a complete pathway for PET degradation. Moreover, strain IITR131 was found to have a variety of genes encoding for enzymes for the metabolism of several plastic polymers, xenobiotics including chloroalkanes, and polycyclic aromatic hydrocarbons.</p><p><strong>Conclusions: </strong>Rhodococcus rhodochrous IITR131 demonstrated a significant potential in the biodegradation of PET. The comprehensive genomic and metabolic analyses further elucidated the molecular pathway involved in PET degradation, enhancing our understanding of the mechanisms underlying microbial PET biodegradation. These findings underscore the applicability of R. rhodochrous IITR131 in biotechnological approaches for mitigating plastic pollution.</p>","PeriodicalId":15036,"journal":{"name":"Journal of Applied Microbiology","volume":" ","pages":""},"PeriodicalIF":3.2000,"publicationDate":"2025-01-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Biochemical and molecular mechanisms of Rhodococcus rhodochrous IITR131 for polyethylene terephthalate degradation.\",\"authors\":\"Pallavi Srivastava, Srikrishna Subramanian, Natesan Manickam\",\"doi\":\"10.1093/jambio/lxae312\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Aims: </strong>To isolate polyethylene terephthalate (PET)-degrading bacteria and elucidate the underlying mechanisms of PET biodegradation through biochemical and genome analysis.</p><p><strong>Methods and results: </strong>Rhodococcus rhodochrous IITR131 was found to degrade PET. Strain IITR131 genome revealed metabolic versatility of the bacterium and had the ability to form biofilm on PET sheet, resulting in the cracks, abrasions, and degradation. IITR131 showed a reduction of 19.7%, exhibiting a half-life of 189.9 d of 0.1 mm PET film in 60 d and formed metabolites bis(2-hydroxyethyl) terephthalate (BHET), terephthalic acid (TPA), and benzoic acid (BA). The draft genome of 5.9 Mb of IITR131 revealed that this bacterium has plethora of genes such as terephthalate 1, 2 dioxygenase, carboxylesterase that together constituted a complete pathway for PET degradation. Moreover, strain IITR131 was found to have a variety of genes encoding for enzymes for the metabolism of several plastic polymers, xenobiotics including chloroalkanes, and polycyclic aromatic hydrocarbons.</p><p><strong>Conclusions: </strong>Rhodococcus rhodochrous IITR131 demonstrated a significant potential in the biodegradation of PET. The comprehensive genomic and metabolic analyses further elucidated the molecular pathway involved in PET degradation, enhancing our understanding of the mechanisms underlying microbial PET biodegradation. These findings underscore the applicability of R. rhodochrous IITR131 in biotechnological approaches for mitigating plastic pollution.</p>\",\"PeriodicalId\":15036,\"journal\":{\"name\":\"Journal of Applied Microbiology\",\"volume\":\" \",\"pages\":\"\"},\"PeriodicalIF\":3.2000,\"publicationDate\":\"2025-01-06\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Applied Microbiology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1093/jambio/lxae312\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"BIOTECHNOLOGY & APPLIED MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Applied Microbiology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1093/jambio/lxae312","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOTECHNOLOGY & APPLIED MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0
摘要
目的:分离聚对苯二甲酸乙二醇酯(PET)降解菌,并通过生化和基因组分析阐明PET生物降解的机制。方法与结果:发现一株Rhodococcus rhodochrous IITR131可降解PET。菌株IITR131基因组揭示了细菌的代谢多样性,并具有在PET薄片上形成生物膜的能力,导致裂缝、磨损和降解。IITR131的还原率为19.7%,0.1 mm PET薄膜在60 d内的半衰期为189.9 d,并形成代谢物对苯二甲酸(2-羟乙基)(BHET)、对苯二甲酸(TPA)和苯甲酸(BA)。IITR131的5.9 Mb基因组草图显示,该细菌具有大量的基因,如对苯二甲酸1,2双加氧酶、羧酸酯酶,这些基因共同构成了PET降解的完整途径。此外,菌株IITR131被发现具有多种编码酶的基因,用于代谢几种塑料聚合物,包括氯烷在内的异种生物和多环芳烃。结论:rhodochrous IITR131在PET的生物降解方面具有显著的潜力。全面的基因组和代谢分析进一步阐明了PET降解的分子途径,增强了我们对微生物PET生物降解机制的理解。这些发现强调了rhodochrous IITR131在减轻塑料污染的生物技术方法中的适用性。
Biochemical and molecular mechanisms of Rhodococcus rhodochrous IITR131 for polyethylene terephthalate degradation.
Aims: To isolate polyethylene terephthalate (PET)-degrading bacteria and elucidate the underlying mechanisms of PET biodegradation through biochemical and genome analysis.
Methods and results: Rhodococcus rhodochrous IITR131 was found to degrade PET. Strain IITR131 genome revealed metabolic versatility of the bacterium and had the ability to form biofilm on PET sheet, resulting in the cracks, abrasions, and degradation. IITR131 showed a reduction of 19.7%, exhibiting a half-life of 189.9 d of 0.1 mm PET film in 60 d and formed metabolites bis(2-hydroxyethyl) terephthalate (BHET), terephthalic acid (TPA), and benzoic acid (BA). The draft genome of 5.9 Mb of IITR131 revealed that this bacterium has plethora of genes such as terephthalate 1, 2 dioxygenase, carboxylesterase that together constituted a complete pathway for PET degradation. Moreover, strain IITR131 was found to have a variety of genes encoding for enzymes for the metabolism of several plastic polymers, xenobiotics including chloroalkanes, and polycyclic aromatic hydrocarbons.
Conclusions: Rhodococcus rhodochrous IITR131 demonstrated a significant potential in the biodegradation of PET. The comprehensive genomic and metabolic analyses further elucidated the molecular pathway involved in PET degradation, enhancing our understanding of the mechanisms underlying microbial PET biodegradation. These findings underscore the applicability of R. rhodochrous IITR131 in biotechnological approaches for mitigating plastic pollution.
期刊介绍:
Journal of & Letters in Applied Microbiology are two of the flagship research journals of the Society for Applied Microbiology (SfAM). For more than 75 years they have been publishing top quality research and reviews in the broad field of applied microbiology. The journals are provided to all SfAM members as well as having a global online readership totalling more than 500,000 downloads per year in more than 200 countries. Submitting authors can expect fast decision and publication times, averaging 33 days to first decision and 34 days from acceptance to online publication. There are no page charges.