中尺度问题分子液体模型的粗粒化方法

IF 3.5 3区 工程技术 Q2 ENGINEERING, CHEMICAL AIChE Journal Pub Date : 2024-12-23 DOI:10.1002/aic.18700
Hasan Zerze, Ayush Gupta, Atanu Baksi, Dipayan Chakraborty, Peter G. Vekilov, Jeffrey D. Rimer, Gül H. Zerze
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引用次数: 0

摘要

分子相互作用的有效建模是理解和模拟大规模化学和生化系统的基础。在这里,我们介绍了一种新的粗粒化策略,该策略采用Lennard-Jones (LJ)势来模拟控制中尺度行为的溶剂-溶剂和溶质-溶剂相互作用。我们的方法保持了捕获基本热物理性质(如密度和蒸汽压)的准确性,同时简化了溶剂分子的表示。通过将多个溶剂分子聚集成一个头,我们的模型为研究溶剂集体行为起关键作用的系统中的溶剂化特性提供了一个强大的工具。这种方法可以对各种中尺度现象进行有效的计算研究,包括聚合物混合物中的相变、小有机分子的浓缩溶液和生物自组装。我们通过模拟饱和胆固醇-乙醇溶液证明了我们方法的稳健性,举例说明了它具有精确和高效地处理大规模系统的能力。
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A coarse-graining approach to model molecular liquids for mesoscale problems

Effective modeling of molecular interactions is fundamental for understanding and simulating large-scale chemical and biochemical systems. Here, we introduce a novel coarse-graining strategy that employs the Lennard–Jones (LJ) potential to model solvent–solvent and solute–solvent interactions that control mesoscale behaviors. Our approach maintains the accuracy in capturing essential thermophysical properties such as densities and vapor pressures, while simplifying the representation of solvent molecules. By aggregating multiple solvent molecules into a single bead, our model offers a robust tool for studying solvation properties in systems where the collective behavior of solvents plays a crucial role. This approach enables effective computational studies across various mesoscale phenomena, including phase transitions in polymer blends, concentrated solutions of small organic molecules, and biological self-assembly. We demonstrate the robustness of our approach by simulating a saturated cholesterol–ethanol solution, exemplifying its power to tackle large-scale systems with precision and efficiency.

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来源期刊
AIChE Journal
AIChE Journal 工程技术-工程:化工
CiteScore
7.10
自引率
10.80%
发文量
411
审稿时长
3.6 months
期刊介绍: The AIChE Journal is the premier research monthly in chemical engineering and related fields. This peer-reviewed and broad-based journal reports on the most important and latest technological advances in core areas of chemical engineering as well as in other relevant engineering disciplines. To keep abreast with the progressive outlook of the profession, the Journal has been expanding the scope of its editorial contents to include such fast developing areas as biotechnology, electrochemical engineering, and environmental engineering. The AIChE Journal is indeed the global communications vehicle for the world-renowned researchers to exchange top-notch research findings with one another. Subscribing to the AIChE Journal is like having immediate access to nine topical journals in the field. Articles are categorized according to the following topical areas: Biomolecular Engineering, Bioengineering, Biochemicals, Biofuels, and Food Inorganic Materials: Synthesis and Processing Particle Technology and Fluidization Process Systems Engineering Reaction Engineering, Kinetics and Catalysis Separations: Materials, Devices and Processes Soft Materials: Synthesis, Processing and Products Thermodynamics and Molecular-Scale Phenomena Transport Phenomena and Fluid Mechanics.
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