健康个体在分级常压缺氧期间的生理、生化和全基因组表达模式。

IF 2.5 4区 生物学 Q3 CELL BIOLOGY Physiological genomics Pub Date : 2025-02-01 Epub Date: 2024-12-24 DOI:10.1152/physiolgenomics.00056.2024
Ritu Rani, Rintu Kutum, Deep Shikha Punera, Anand Prakash Yadav, Vishal Bansal, Bhavana Prasher
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引用次数: 0

摘要

氧稳态的调节在生理和疾病发病中起着至关重要的作用。高海拔环境或缺氧(缺氧)可导致不利的健康状况,如HAPE,尽管最初的适应性生理反应。研究缺氧的遗传、血液学、生化和生理结果可以产生一个全面的了解,并有可能发现有价值的生物标志物来预测反应。为此,招募健康个体(n=51)并进行分级常压缺氧。持续监测心率(HR)、心率变异性(HRV)、血氧饱和度(SpO2)和血压(BP)等生理参数,并在缺氧暴露前后采集血液样本进行血液学和基因表达谱分析。HR升高,SpO2和HRV显著降低,并呈o2依赖性。缺氧后,HCT、RDW-CV、MPV、血小板分布宽度、血小板电积、嗜酸性粒细胞、淋巴细胞和hdl -胆固醇均有轻微下降。此外,中性粒细胞也有轻微的增加。在一部分个体的全基因组表达水平上进一步评估了缺氧的影响。82个基因在缺氧暴露后差异显著,其中46个基因上调,36个基因下调(p≤0.05,log2倍变化>±0.5)。我们还对与生理参数相关的全球基因表达谱进行了综合分析,并发现了许多与BP、SpO2、HR和HRV相关的可靠基因特征,这些基因特征与分级常压缺氧的反应有关。
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Physiological, biochemical, and genome-wide expression patterns during graded normobaric hypoxia in healthy individuals.

The regulation of oxygen homeostasis is critical in physiology and disease pathogenesis. High-altitude environment or hypoxia (lack of oxygen) can lead to adverse health conditions such as high-altitude pulmonary edema (HAPE) despite initial adaptive physiological responses. Studying genetic, hematological and biochemical, and the physiological outcomes of hypoxia together could yield a comprehensive understanding and potentially uncover valuable biomarkers for predicting responses. To this end, healthy individuals (n = 51) were recruited and exposed to graded normobaric hypoxia. Physiological parameters such as heart rate (HR), heart rate variability (HRV), oxygen saturation (Spo2), and blood pressure (BP) were constantly monitored, and a blood sample was collected before and after the hypoxia exposure for the hematological and gene-expression profiles. HR was elevated, and Spo2 and HRV were significantly reduced in a fraction of inspired oxygen ([Formula: see text])-dependent manner. After exposure to hypoxia, there was a minimal decrease in HCT, red blood cell distribution width (RDW)-coefficient of variation (CV), mean platelet volume (MPV), platelet distribution width, plateletcrit, eosinophils, lymphocytes, and HDL cholesterol. Additionally, there was a marginal increase observed in neutrophils. The effect of hypoxia was further assessed at the genome-wide expression level in a subset of individuals. Eighty-two genes significantly differed after hypoxia exposure, with 46 upregulated genes and 36 downregulated genes (P ≤ 0.05 and log2-fold change greater than ±0.5). We also conducted an integrative analysis of global gene expression profiles linked with physiological parameters, and we uncovered numerous reliable gene signatures associated with BP, Spo2, HR, and HRV in response to graded normobaric hypoxia.NEW & NOTEWORTHY Our study delves into the multifaceted response to hypoxia, integrating gene expression and hematological, biochemical, and physiological assessments. Hypoxia, crucial in both physiology and pathology, prompts varied responses, necessitating a thorough systemic understanding. Examining healthy subjects exposed to graded normobaric hypoxia, we observed significant shifts in heart rate, oxygen saturation, and heart rate variability. Moreover, genomic analysis unveiled distinct gene signatures associated with physiological parameters, offering insights into molecular perturbations and adaptations to oxygen deprivation.

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来源期刊
Physiological genomics
Physiological genomics 生物-生理学
CiteScore
6.10
自引率
0.00%
发文量
46
审稿时长
4-8 weeks
期刊介绍: The Physiological Genomics publishes original papers, reviews and rapid reports in a wide area of research focused on uncovering the links between genes and physiology at all levels of biological organization. Articles on topics ranging from single genes to the whole genome and their links to the physiology of humans, any model organism, organ, tissue or cell are welcome. Areas of interest include complex polygenic traits preferably of importance to human health and gene-function relationships of disease processes. Specifically, the Journal has dedicated Sections focused on genome-wide association studies (GWAS) to function, cardiovascular, renal, metabolic and neurological systems, exercise physiology, pharmacogenomics, clinical, translational and genomics for precision medicine, comparative and statistical genomics and databases. For further details on research themes covered within these Sections, please refer to the descriptions given under each Section.
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