鸡T淋巴细胞CD8A基因稳定敲除和过表达的转录组和代谢组分析。

IF 3.8 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Poultry Science Pub Date : 2025-02-01 DOI:10.1016/j.psj.2024.104686
Yanli Du , Kun Wang , Xiannian Zi , Xiao Wang , Meiquan Li , Bo Zhang , Jinshan Ran , Wei Huang , Jing Wang , Cuilian Dong , Hanyi Xiang , Li Lei , Changrong Ge , Yong Liu
{"title":"鸡T淋巴细胞CD8A基因稳定敲除和过表达的转录组和代谢组分析。","authors":"Yanli Du ,&nbsp;Kun Wang ,&nbsp;Xiannian Zi ,&nbsp;Xiao Wang ,&nbsp;Meiquan Li ,&nbsp;Bo Zhang ,&nbsp;Jinshan Ran ,&nbsp;Wei Huang ,&nbsp;Jing Wang ,&nbsp;Cuilian Dong ,&nbsp;Hanyi Xiang ,&nbsp;Li Lei ,&nbsp;Changrong Ge ,&nbsp;Yong Liu","doi":"10.1016/j.psj.2024.104686","DOIUrl":null,"url":null,"abstract":"<div><div>CD8 subunit alpha (<strong>CD8A</strong>) is an important gene in immunity and is involved in the functional regulation of T lymphocytes. However, the specific role and regulatory mechanism of CD8A in chicken T lymphocytes remain unknown. In this study, we overexpressed and interfered with CD8A in chicken T lymphocytes and found that interfering with CD8A expression inhibited the proliferation and induced the apoptosis of T lymphocytes and that the overexpression of CD8A promoted T lymphocyte activation. Additionally, transcriptomic and metabolomic analyses of chicken T lymphocytes with CD8A overexpression or interference were performed. The overexpression and interference of the CD8A gene caused widespread changes in gene and metabolite expression in chicken T cells. The results of the transcriptome analysis revealed that differentially expressed genes (<strong>DEGs</strong>) caused by altered expression of the CD8A gene were associated with multiple “neuroactive ligand-receptor interaction”, “cell adhesion molecules”, “calcium signaling pathway”, etc. The metabolome analysis results revealed that different metabolites (<strong>DMs</strong>) caused by altered CD8A gene expression were associated with “Glutathione metabolism”, “Arginine biosynthesis”, “D-amino acid metabolism”, etc. The combined transcriptional and metabolic analysis revealed one metabolically related pathway, “Glutathione metabolism”. Our findings further revealed that interference and overexpression of CD8A plays a role in the metabolism of Glutathione. Thus, CD8A may be a critical regulator of “Glutathione metabolism” and may subsequently affect T-cell function in chickens. These results provide an important reference for further research on the effect of CD8A on the immune performance of chickens.</div></div>","PeriodicalId":20459,"journal":{"name":"Poultry Science","volume":"104 2","pages":"Article 104686"},"PeriodicalIF":3.8000,"publicationDate":"2025-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11748709/pdf/","citationCount":"0","resultStr":"{\"title\":\"Combined transcriptome and metabolome analysis of stable knockdown and overexpression of the CD8A gene in chicken T lymphocytes\",\"authors\":\"Yanli Du ,&nbsp;Kun Wang ,&nbsp;Xiannian Zi ,&nbsp;Xiao Wang ,&nbsp;Meiquan Li ,&nbsp;Bo Zhang ,&nbsp;Jinshan Ran ,&nbsp;Wei Huang ,&nbsp;Jing Wang ,&nbsp;Cuilian Dong ,&nbsp;Hanyi Xiang ,&nbsp;Li Lei ,&nbsp;Changrong Ge ,&nbsp;Yong Liu\",\"doi\":\"10.1016/j.psj.2024.104686\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>CD8 subunit alpha (<strong>CD8A</strong>) is an important gene in immunity and is involved in the functional regulation of T lymphocytes. However, the specific role and regulatory mechanism of CD8A in chicken T lymphocytes remain unknown. In this study, we overexpressed and interfered with CD8A in chicken T lymphocytes and found that interfering with CD8A expression inhibited the proliferation and induced the apoptosis of T lymphocytes and that the overexpression of CD8A promoted T lymphocyte activation. Additionally, transcriptomic and metabolomic analyses of chicken T lymphocytes with CD8A overexpression or interference were performed. The overexpression and interference of the CD8A gene caused widespread changes in gene and metabolite expression in chicken T cells. The results of the transcriptome analysis revealed that differentially expressed genes (<strong>DEGs</strong>) caused by altered expression of the CD8A gene were associated with multiple “neuroactive ligand-receptor interaction”, “cell adhesion molecules”, “calcium signaling pathway”, etc. The metabolome analysis results revealed that different metabolites (<strong>DMs</strong>) caused by altered CD8A gene expression were associated with “Glutathione metabolism”, “Arginine biosynthesis”, “D-amino acid metabolism”, etc. The combined transcriptional and metabolic analysis revealed one metabolically related pathway, “Glutathione metabolism”. Our findings further revealed that interference and overexpression of CD8A plays a role in the metabolism of Glutathione. Thus, CD8A may be a critical regulator of “Glutathione metabolism” and may subsequently affect T-cell function in chickens. These results provide an important reference for further research on the effect of CD8A on the immune performance of chickens.</div></div>\",\"PeriodicalId\":20459,\"journal\":{\"name\":\"Poultry Science\",\"volume\":\"104 2\",\"pages\":\"Article 104686\"},\"PeriodicalIF\":3.8000,\"publicationDate\":\"2025-02-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11748709/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Poultry Science\",\"FirstCategoryId\":\"97\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0032579124012641\",\"RegionNum\":1,\"RegionCategory\":\"农林科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"AGRICULTURE, DAIRY & ANIMAL SCIENCE\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Poultry Science","FirstCategoryId":"97","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0032579124012641","RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"AGRICULTURE, DAIRY & ANIMAL SCIENCE","Score":null,"Total":0}
引用次数: 0

摘要

CD8亚单位α (CD8A)是免疫中的重要基因,参与T淋巴细胞的功能调控。然而,CD8A在鸡T淋巴细胞中的具体作用和调控机制尚不清楚。在本研究中,我们在鸡T淋巴细胞中过表达和干扰CD8A,发现干扰CD8A表达抑制T淋巴细胞增殖,诱导T淋巴细胞凋亡,过表达CD8A促进T淋巴细胞活化。此外,我们还对CD8A过表达或干扰的鸡T淋巴细胞进行了转录组学和代谢组学分析。CD8A基因的过表达和干扰导致鸡T细胞中基因和代谢物表达的广泛变化。转录组分析结果显示,CD8A基因表达改变引起的差异表达基因(DEGs)与多种“神经活性配体-受体相互作用”、“细胞粘附分子”、“钙信号通路”等相关。代谢组学分析结果显示,CD8A基因表达改变导致的不同代谢产物与“谷胱甘肽代谢”、“精氨酸生物合成”、“d -氨基酸代谢”等相关。结合转录和代谢分析发现了一条代谢相关途径,即“谷胱甘肽代谢”。我们的研究结果进一步揭示了CD8A的干扰和过表达在谷胱甘肽的代谢中起作用。因此,CD8A可能是“谷胱甘肽代谢”的关键调节因子,并可能随后影响鸡的t细胞功能。这些结果为进一步研究CD8A对鸡免疫性能的影响提供了重要参考。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Combined transcriptome and metabolome analysis of stable knockdown and overexpression of the CD8A gene in chicken T lymphocytes
CD8 subunit alpha (CD8A) is an important gene in immunity and is involved in the functional regulation of T lymphocytes. However, the specific role and regulatory mechanism of CD8A in chicken T lymphocytes remain unknown. In this study, we overexpressed and interfered with CD8A in chicken T lymphocytes and found that interfering with CD8A expression inhibited the proliferation and induced the apoptosis of T lymphocytes and that the overexpression of CD8A promoted T lymphocyte activation. Additionally, transcriptomic and metabolomic analyses of chicken T lymphocytes with CD8A overexpression or interference were performed. The overexpression and interference of the CD8A gene caused widespread changes in gene and metabolite expression in chicken T cells. The results of the transcriptome analysis revealed that differentially expressed genes (DEGs) caused by altered expression of the CD8A gene were associated with multiple “neuroactive ligand-receptor interaction”, “cell adhesion molecules”, “calcium signaling pathway”, etc. The metabolome analysis results revealed that different metabolites (DMs) caused by altered CD8A gene expression were associated with “Glutathione metabolism”, “Arginine biosynthesis”, “D-amino acid metabolism”, etc. The combined transcriptional and metabolic analysis revealed one metabolically related pathway, “Glutathione metabolism”. Our findings further revealed that interference and overexpression of CD8A plays a role in the metabolism of Glutathione. Thus, CD8A may be a critical regulator of “Glutathione metabolism” and may subsequently affect T-cell function in chickens. These results provide an important reference for further research on the effect of CD8A on the immune performance of chickens.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Poultry Science
Poultry Science 农林科学-奶制品与动物科学
CiteScore
7.60
自引率
15.90%
发文量
0
审稿时长
94 days
期刊介绍: First self-published in 1921, Poultry Science is an internationally renowned monthly journal, known as the authoritative source for a broad range of poultry information and high-caliber research. The journal plays a pivotal role in the dissemination of preeminent poultry-related knowledge across all disciplines. As of January 2020, Poultry Science will become an Open Access journal with no subscription charges, meaning authors who publish here can make their research immediately, permanently, and freely accessible worldwide while retaining copyright to their work. Papers submitted for publication after October 1, 2019 will be published as Open Access papers. An international journal, Poultry Science publishes original papers, research notes, symposium papers, and reviews of basic science as applied to poultry. This authoritative source of poultry information is consistently ranked by ISI Impact Factor as one of the top 10 agriculture, dairy and animal science journals to deliver high-caliber research. Currently it is the highest-ranked (by Impact Factor and Eigenfactor) journal dedicated to publishing poultry research. Subject areas include breeding, genetics, education, production, management, environment, health, behavior, welfare, immunology, molecular biology, metabolism, nutrition, physiology, reproduction, processing, and products.
期刊最新文献
Transcriptome and chromatin accessibility landscape of ovarian development at different egg-laying stages in taihe black-bone silky fowls Corrigendum to “Pulsed electric field (PEF) processing of microalga Chlorella vulgaris and its digestibility in broiler feed” [Poultry Science, Volume 103, Issue 6, June 2024, 103721] Corrigendum to “Impact of adding zeolite to broilers' diet and litter on growth, blood parameters, immunity, and ammonia emission” [Poultry Science, Volume 103, Issue 9, September 2024, 103981] Research note: Mite infestations in non-descriptive indigenous chickens in Bangladesh: Present status and pathology Changes in gut microbiota affect DNA methylation levels and development of chicken muscle tissue
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1