Md Sahadul Hasan Arian , Faisal Ahmed Sifat , Saif Ahmed , Nabeel Mohammed , Taseef Hasan Farook
{"title":"基于合成数据域自适应的牙弓三维扫描无监督牙齿分割。","authors":"Md Sahadul Hasan Arian , Faisal Ahmed Sifat , Saif Ahmed , Nabeel Mohammed , Taseef Hasan Farook","doi":"10.1016/j.ijmedinf.2024.105769","DOIUrl":null,"url":null,"abstract":"<div><h3>Background</h3><div>The automated segmentation of individual teeth from 3D models of the human dental arch is challenging due to variations in tooth alignment, arch form and overall maxillofacial anatomy. Domain adaptation is a specialised technique in deep learning which allows models to adapt to data from different domains, such as varying tooth and dental arch forms, without requiring human annotations.</div></div><div><h3>Purpose</h3><div>This study aimed to segment individual teeth from various dental arch morphologies in 3D intraoral scans using domain adaptation.</div></div><div><h3>Materials and Methods</h3><div>Twenty scanned dental arches from various age groups and developmental stages were used to generate 20 simplified synthetic variants of the scans. These synthetic variants, along with 16 natural scanned dental arches, were used to train the deep learning models. Domain adaptation was employed using Gradient Reversal Layer and Siamese Network techniques. The PointNet and PointNet++ model backbones were trained to align the latent space distribution of real and synthetic domains. Validations were performed on four unseen natural scanned arches, with and without domain adaptation enabled, to evaluate whether a 3D deep neural network can be trained without any human-annotated 3D models.</div></div><div><h3>Results</h3><div>PointNet and PointNet++ models demonstrated a mean intersection-over-union between 0.34 and 0.36 mIoU without domain adaptation enabled and 0.80 and 0.95 mIoU, respectively with domain adaptation enabled when assessing natural scanned dental arches.</div></div><div><h3>Conclusion</h3><div>Domain adaptation techniques can enable training a segmentation deep learning model using synthetically generated 3D jaw scans without requiring human operators annotating the training data<strong>.</strong></div></div>","PeriodicalId":54950,"journal":{"name":"International Journal of Medical Informatics","volume":"195 ","pages":"Article 105769"},"PeriodicalIF":3.7000,"publicationDate":"2024-12-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Unsupervised tooth segmentation from three dimensional scans of the dental arch using domain adaptation of synthetic data\",\"authors\":\"Md Sahadul Hasan Arian , Faisal Ahmed Sifat , Saif Ahmed , Nabeel Mohammed , Taseef Hasan Farook\",\"doi\":\"10.1016/j.ijmedinf.2024.105769\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><h3>Background</h3><div>The automated segmentation of individual teeth from 3D models of the human dental arch is challenging due to variations in tooth alignment, arch form and overall maxillofacial anatomy. Domain adaptation is a specialised technique in deep learning which allows models to adapt to data from different domains, such as varying tooth and dental arch forms, without requiring human annotations.</div></div><div><h3>Purpose</h3><div>This study aimed to segment individual teeth from various dental arch morphologies in 3D intraoral scans using domain adaptation.</div></div><div><h3>Materials and Methods</h3><div>Twenty scanned dental arches from various age groups and developmental stages were used to generate 20 simplified synthetic variants of the scans. These synthetic variants, along with 16 natural scanned dental arches, were used to train the deep learning models. Domain adaptation was employed using Gradient Reversal Layer and Siamese Network techniques. The PointNet and PointNet++ model backbones were trained to align the latent space distribution of real and synthetic domains. Validations were performed on four unseen natural scanned arches, with and without domain adaptation enabled, to evaluate whether a 3D deep neural network can be trained without any human-annotated 3D models.</div></div><div><h3>Results</h3><div>PointNet and PointNet++ models demonstrated a mean intersection-over-union between 0.34 and 0.36 mIoU without domain adaptation enabled and 0.80 and 0.95 mIoU, respectively with domain adaptation enabled when assessing natural scanned dental arches.</div></div><div><h3>Conclusion</h3><div>Domain adaptation techniques can enable training a segmentation deep learning model using synthetically generated 3D jaw scans without requiring human operators annotating the training data<strong>.</strong></div></div>\",\"PeriodicalId\":54950,\"journal\":{\"name\":\"International Journal of Medical Informatics\",\"volume\":\"195 \",\"pages\":\"Article 105769\"},\"PeriodicalIF\":3.7000,\"publicationDate\":\"2024-12-19\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"International Journal of Medical Informatics\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S1386505624004325\",\"RegionNum\":2,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"COMPUTER SCIENCE, INFORMATION SYSTEMS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"International Journal of Medical Informatics","FirstCategoryId":"3","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1386505624004325","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"COMPUTER SCIENCE, INFORMATION SYSTEMS","Score":null,"Total":0}
Unsupervised tooth segmentation from three dimensional scans of the dental arch using domain adaptation of synthetic data
Background
The automated segmentation of individual teeth from 3D models of the human dental arch is challenging due to variations in tooth alignment, arch form and overall maxillofacial anatomy. Domain adaptation is a specialised technique in deep learning which allows models to adapt to data from different domains, such as varying tooth and dental arch forms, without requiring human annotations.
Purpose
This study aimed to segment individual teeth from various dental arch morphologies in 3D intraoral scans using domain adaptation.
Materials and Methods
Twenty scanned dental arches from various age groups and developmental stages were used to generate 20 simplified synthetic variants of the scans. These synthetic variants, along with 16 natural scanned dental arches, were used to train the deep learning models. Domain adaptation was employed using Gradient Reversal Layer and Siamese Network techniques. The PointNet and PointNet++ model backbones were trained to align the latent space distribution of real and synthetic domains. Validations were performed on four unseen natural scanned arches, with and without domain adaptation enabled, to evaluate whether a 3D deep neural network can be trained without any human-annotated 3D models.
Results
PointNet and PointNet++ models demonstrated a mean intersection-over-union between 0.34 and 0.36 mIoU without domain adaptation enabled and 0.80 and 0.95 mIoU, respectively with domain adaptation enabled when assessing natural scanned dental arches.
Conclusion
Domain adaptation techniques can enable training a segmentation deep learning model using synthetically generated 3D jaw scans without requiring human operators annotating the training data.
期刊介绍:
International Journal of Medical Informatics provides an international medium for dissemination of original results and interpretative reviews concerning the field of medical informatics. The Journal emphasizes the evaluation of systems in healthcare settings.
The scope of journal covers:
Information systems, including national or international registration systems, hospital information systems, departmental and/or physician''s office systems, document handling systems, electronic medical record systems, standardization, systems integration etc.;
Computer-aided medical decision support systems using heuristic, algorithmic and/or statistical methods as exemplified in decision theory, protocol development, artificial intelligence, etc.
Educational computer based programs pertaining to medical informatics or medicine in general;
Organizational, economic, social, clinical impact, ethical and cost-benefit aspects of IT applications in health care.