利用MRI和机器学习诊断精神分裂症及其亚型。

IF 2.6 3区 心理学 Q2 BEHAVIORAL SCIENCES Brain and Behavior Pub Date : 2025-01-01 DOI:10.1002/brb3.70219
Hosna Tavakoli, Reza Rostami, Reza Shalbaf, Mohammad-Reza Nazem-Zadeh
{"title":"利用MRI和机器学习诊断精神分裂症及其亚型。","authors":"Hosna Tavakoli, Reza Rostami, Reza Shalbaf, Mohammad-Reza Nazem-Zadeh","doi":"10.1002/brb3.70219","DOIUrl":null,"url":null,"abstract":"<p><strong>Purpose: </strong>The neurobiological heterogeneity present in schizophrenia remains poorly understood. This likely contributes to the limited success of existing treatments and the observed variability in treatment responses. Our objective was to employ magnetic resonance imaging (MRI) and machine learning (ML) algorithms to improve the classification of schizophrenia and its subtypes.</p><p><strong>Method: </strong>We utilized a public dataset provided by the UCLA (University of California, Los Angeles) Consortium for Neuropsychiatric Research, containing structural MRI and resting-state fMRI (rsfMRI) data. We integrated all individuals within the dataset diagnosed with schizophrenia (N = 50), along with age- and gender-matched healthy individuals (N = 50). We extracted volumetrics of 66 subcortical and thickness of 72 cortical regions. Additionally, we obtained four graph-based measures for 116 intracranial regions from rsfMRI data, including degree, betweenness centrality, participation coefficient, and local efficiency. Employing conventional ML methods, we sought to distinguish the patients with schizophrenia from healthy individuals. Furthermore, we applied the methods for discriminating subtypes of schizophrenia. To streamline the feature set, various feature selection techniques were applied. Moreover, a validation phase involved employing the model on a dataset domestically acquired using the same imaging assessments (N = 13). Finally, we explored the correlation between neuroimaging features and behavioral assessments.</p><p><strong>Finding: </strong>The classification accuracy reached as high as 79% in distinguishing schizophrenia patients from healthy in the UCLA dataset. This result was achieved by the k-nearest neighbor algorithm, utilizing 12 brain neuroimaging features, selected by the feature selection method of minimum redundancy maximum relevance (MRMR). The model demonstrated effectiveness (72% accuracy) in estimating the patient's label for a new dataset acquired domestically. Using a linear support vector machine (SVM) on 62 features obtained from MRMR, patients with schizophrenic subtypes were classified with an accuracy of 64%. The highest Spearman correlation coefficient between the neuroimaging features and behavioral assessments was observed between the degree of the postcentral gyrus and mean reaction time in the verbal capacity task (r = 0.49, p = 0.001).</p><p><strong>Conclusion: </strong>The findings of this study underscore the utility of MRI and ML algorithms in enhancing the diagnostic process for schizophrenia. Furthermore, these methods hold promise for detecting both brain-related abnormalities and cognitive impairments associated with this disorder.</p>","PeriodicalId":9081,"journal":{"name":"Brain and Behavior","volume":"15 1","pages":"e70219"},"PeriodicalIF":2.6000,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11688118/pdf/","citationCount":"0","resultStr":"{\"title\":\"Diagnosis of Schizophrenia and Its Subtypes Using MRI and Machine Learning.\",\"authors\":\"Hosna Tavakoli, Reza Rostami, Reza Shalbaf, Mohammad-Reza Nazem-Zadeh\",\"doi\":\"10.1002/brb3.70219\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Purpose: </strong>The neurobiological heterogeneity present in schizophrenia remains poorly understood. This likely contributes to the limited success of existing treatments and the observed variability in treatment responses. Our objective was to employ magnetic resonance imaging (MRI) and machine learning (ML) algorithms to improve the classification of schizophrenia and its subtypes.</p><p><strong>Method: </strong>We utilized a public dataset provided by the UCLA (University of California, Los Angeles) Consortium for Neuropsychiatric Research, containing structural MRI and resting-state fMRI (rsfMRI) data. We integrated all individuals within the dataset diagnosed with schizophrenia (N = 50), along with age- and gender-matched healthy individuals (N = 50). We extracted volumetrics of 66 subcortical and thickness of 72 cortical regions. Additionally, we obtained four graph-based measures for 116 intracranial regions from rsfMRI data, including degree, betweenness centrality, participation coefficient, and local efficiency. Employing conventional ML methods, we sought to distinguish the patients with schizophrenia from healthy individuals. Furthermore, we applied the methods for discriminating subtypes of schizophrenia. To streamline the feature set, various feature selection techniques were applied. Moreover, a validation phase involved employing the model on a dataset domestically acquired using the same imaging assessments (N = 13). Finally, we explored the correlation between neuroimaging features and behavioral assessments.</p><p><strong>Finding: </strong>The classification accuracy reached as high as 79% in distinguishing schizophrenia patients from healthy in the UCLA dataset. This result was achieved by the k-nearest neighbor algorithm, utilizing 12 brain neuroimaging features, selected by the feature selection method of minimum redundancy maximum relevance (MRMR). The model demonstrated effectiveness (72% accuracy) in estimating the patient's label for a new dataset acquired domestically. Using a linear support vector machine (SVM) on 62 features obtained from MRMR, patients with schizophrenic subtypes were classified with an accuracy of 64%. The highest Spearman correlation coefficient between the neuroimaging features and behavioral assessments was observed between the degree of the postcentral gyrus and mean reaction time in the verbal capacity task (r = 0.49, p = 0.001).</p><p><strong>Conclusion: </strong>The findings of this study underscore the utility of MRI and ML algorithms in enhancing the diagnostic process for schizophrenia. Furthermore, these methods hold promise for detecting both brain-related abnormalities and cognitive impairments associated with this disorder.</p>\",\"PeriodicalId\":9081,\"journal\":{\"name\":\"Brain and Behavior\",\"volume\":\"15 1\",\"pages\":\"e70219\"},\"PeriodicalIF\":2.6000,\"publicationDate\":\"2025-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11688118/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Brain and Behavior\",\"FirstCategoryId\":\"102\",\"ListUrlMain\":\"https://doi.org/10.1002/brb3.70219\",\"RegionNum\":3,\"RegionCategory\":\"心理学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"BEHAVIORAL SCIENCES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Brain and Behavior","FirstCategoryId":"102","ListUrlMain":"https://doi.org/10.1002/brb3.70219","RegionNum":3,"RegionCategory":"心理学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BEHAVIORAL SCIENCES","Score":null,"Total":0}
引用次数: 0

摘要

目的:精神分裂症中存在的神经生物学异质性仍然知之甚少。这可能导致现有治疗方法的有限成功和观察到的治疗反应的可变性。我们的目标是使用磁共振成像(MRI)和机器学习(ML)算法来改进精神分裂症及其亚型的分类。方法:我们利用UCLA(加州大学洛杉矶分校)神经精神病学研究联盟提供的公共数据集,其中包含结构MRI和静息状态fMRI (rsfMRI)数据。我们整合了数据集中诊断为精神分裂症的所有个体(N = 50),以及年龄和性别匹配的健康个体(N = 50)。我们提取了66个皮质下区域的体积和72个皮质区域的厚度。此外,我们从rsfMRI数据中获得了116个颅内区域的4个基于图的测量指标,包括程度、中间中心性、参与系数和局部效率。采用传统的ML方法,我们试图将精神分裂症患者与健康个体区分开来。此外,我们还应用了区分精神分裂症亚型的方法。为了简化特征集,应用了各种特征选择技术。此外,验证阶段涉及使用相同的成像评估在国内获得的数据集上使用模型(N = 13)。最后,我们探讨了神经影像学特征与行为评估之间的相关性。发现:在加州大学洛杉矶分校的数据集中,区分精神分裂症患者和健康患者的分类准确率高达79%。该结果是通过k近邻算法实现的,该算法利用最小冗余最大相关性(MRMR)特征选择方法选择12个脑神经成像特征。该模型在估计国内获得的新数据集的患者标签方面显示出有效性(准确率为72%)。使用线性支持向量机(SVM)对从MRMR中获得的62个特征进行分类,准确率为64%。在言语能力任务中,中枢后回的程度与平均反应时间之间的Spearman相关系数最高(r = 0.49, p = 0.001)。结论:本研究的发现强调了MRI和ML算法在增强精神分裂症诊断过程中的效用。此外,这些方法有望检测与大脑相关的异常和与这种疾病相关的认知障碍。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Diagnosis of Schizophrenia and Its Subtypes Using MRI and Machine Learning.

Purpose: The neurobiological heterogeneity present in schizophrenia remains poorly understood. This likely contributes to the limited success of existing treatments and the observed variability in treatment responses. Our objective was to employ magnetic resonance imaging (MRI) and machine learning (ML) algorithms to improve the classification of schizophrenia and its subtypes.

Method: We utilized a public dataset provided by the UCLA (University of California, Los Angeles) Consortium for Neuropsychiatric Research, containing structural MRI and resting-state fMRI (rsfMRI) data. We integrated all individuals within the dataset diagnosed with schizophrenia (N = 50), along with age- and gender-matched healthy individuals (N = 50). We extracted volumetrics of 66 subcortical and thickness of 72 cortical regions. Additionally, we obtained four graph-based measures for 116 intracranial regions from rsfMRI data, including degree, betweenness centrality, participation coefficient, and local efficiency. Employing conventional ML methods, we sought to distinguish the patients with schizophrenia from healthy individuals. Furthermore, we applied the methods for discriminating subtypes of schizophrenia. To streamline the feature set, various feature selection techniques were applied. Moreover, a validation phase involved employing the model on a dataset domestically acquired using the same imaging assessments (N = 13). Finally, we explored the correlation between neuroimaging features and behavioral assessments.

Finding: The classification accuracy reached as high as 79% in distinguishing schizophrenia patients from healthy in the UCLA dataset. This result was achieved by the k-nearest neighbor algorithm, utilizing 12 brain neuroimaging features, selected by the feature selection method of minimum redundancy maximum relevance (MRMR). The model demonstrated effectiveness (72% accuracy) in estimating the patient's label for a new dataset acquired domestically. Using a linear support vector machine (SVM) on 62 features obtained from MRMR, patients with schizophrenic subtypes were classified with an accuracy of 64%. The highest Spearman correlation coefficient between the neuroimaging features and behavioral assessments was observed between the degree of the postcentral gyrus and mean reaction time in the verbal capacity task (r = 0.49, p = 0.001).

Conclusion: The findings of this study underscore the utility of MRI and ML algorithms in enhancing the diagnostic process for schizophrenia. Furthermore, these methods hold promise for detecting both brain-related abnormalities and cognitive impairments associated with this disorder.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Brain and Behavior
Brain and Behavior BEHAVIORAL SCIENCES-NEUROSCIENCES
CiteScore
5.30
自引率
0.00%
发文量
352
审稿时长
14 weeks
期刊介绍: Brain and Behavior is supported by other journals published by Wiley, including a number of society-owned journals. The journals listed below support Brain and Behavior and participate in the Manuscript Transfer Program by referring articles of suitable quality and offering authors the option to have their paper, with any peer review reports, automatically transferred to Brain and Behavior. * [Acta Psychiatrica Scandinavica](https://publons.com/journal/1366/acta-psychiatrica-scandinavica) * [Addiction Biology](https://publons.com/journal/1523/addiction-biology) * [Aggressive Behavior](https://publons.com/journal/3611/aggressive-behavior) * [Brain Pathology](https://publons.com/journal/1787/brain-pathology) * [Child: Care, Health and Development](https://publons.com/journal/6111/child-care-health-and-development) * [Criminal Behaviour and Mental Health](https://publons.com/journal/3839/criminal-behaviour-and-mental-health) * [Depression and Anxiety](https://publons.com/journal/1528/depression-and-anxiety) * Developmental Neurobiology * [Developmental Science](https://publons.com/journal/1069/developmental-science) * [European Journal of Neuroscience](https://publons.com/journal/1441/european-journal-of-neuroscience) * [Genes, Brain and Behavior](https://publons.com/journal/1635/genes-brain-and-behavior) * [GLIA](https://publons.com/journal/1287/glia) * [Hippocampus](https://publons.com/journal/1056/hippocampus) * [Human Brain Mapping](https://publons.com/journal/500/human-brain-mapping) * [Journal for the Theory of Social Behaviour](https://publons.com/journal/7330/journal-for-the-theory-of-social-behaviour) * [Journal of Comparative Neurology](https://publons.com/journal/1306/journal-of-comparative-neurology) * [Journal of Neuroimaging](https://publons.com/journal/6379/journal-of-neuroimaging) * [Journal of Neuroscience Research](https://publons.com/journal/2778/journal-of-neuroscience-research) * [Journal of Organizational Behavior](https://publons.com/journal/1123/journal-of-organizational-behavior) * [Journal of the Peripheral Nervous System](https://publons.com/journal/3929/journal-of-the-peripheral-nervous-system) * [Muscle & Nerve](https://publons.com/journal/4448/muscle-and-nerve) * [Neural Pathology and Applied Neurobiology](https://publons.com/journal/2401/neuropathology-and-applied-neurobiology)
期刊最新文献
A Neural Circuit From Paraventricular Nucleus of the Thalamus to the Nucleus Accumbens Mediates Inflammatory Pain in Mice. Assessment of MGMT and TERT Subtypes and Prognosis of Glioblastoma by Whole Tumor Apparent Diffusion Coefficient Histogram Analysis. Association Between Depressive Symptoms and Comorbidities Among Elderly Diabetic Individuals in China. Cerebral Cavernous Malformation: From Genetics to Pharmacotherapy. Deep Learning-Based Prediction of Freezing of Gait in Parkinson's Disease With the Ensemble Channel Selection Approach.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1