人瞬时受体电位阳离子通道TRPM8、TRPV1和TRPA1 384孔动态Ca2+动员实验的优化和校准

IF 2.7 4区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS SLAS Discovery Pub Date : 2025-01-01 DOI:10.1016/j.slasd.2024.100207
David A. Close , V. Blair Journigan , Paul A. Johnston
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引用次数: 0

摘要

本文描述了TRPM8、TRPV1和TRPA1的人类瞬时受体电位(TRP)通道Ca2+动员测定的开发、优化和校准。HEK293T细胞需要异源表达hTRPM8,以获得抗TRPM8抗体染色和TRPM8激动剂诱导的Ca2+动员信号,两者都用于优化转染效率。优化FLIPR钙6染料浓度、加载时间、TRPM8转染细胞播种密度,设定DMSO耐受性≤0.2%。TRPM8 Ca2+动员试验的静息基线相对荧光单位(RFUs)信号显示出大量的井间变异性,尽管这种差异相对于最大激动剂诱导的反应来说很小。从Ca2+动员动力学数据中提取最大RFU、累计RFU总和或曲线下面积,绘制曲线并计算EC50和IC50值。折叠基线(FOB)比率数据处理消除了井与井之间静息基线信号的差异,减少了误差条,改善了曲线拟合,降低了95%置信区间EC50和IC50范围。FOB比率数据处理降低了可变性,提高了单次实验中重复测量的精度,从而降低了区分化合物效价所需的EC50或IC50值的最小阈值差异。单次实验测定的TRPM8激动剂和拮抗剂的EC50和IC50值与多个独立实验的结果高度一致。基准TRPM8、TRPV1和TRPA1的EC50和IC50值均在先前报道的激动剂和拮抗剂标准范围内。FOB比率数据处理提高了TRP Ca2+动员测定的精度和准确性,提高了它们在研究结构活性关系方面的实用性。
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Optimization and calibration of 384-well kinetic Ca2+ mobilization assays for the human transient receptor potential cation channels TRPM8, TRPV1, and TRPA1
Development, optimization, and calibration of human transient receptor potential (TRP) channel Ca2+ mobilization assays for TRPM8, TRPV1, and TRPA1 are described. Heterologous expression of hTRPM8 in HEK293T cells was required for anti-TRPM8 antibody staining and TRPM8 agonist induced Ca2+ mobilization signals which were both used to optimize transfection efficiency. FLIPR Calcium 6 dye concentration, loading time, and TRPM8 transfected cell seeding density were optimized and a DMSO tolerance of ≤0.2 % was set. The resting baseline relative fluorescent unit (RFUs) signals of the TRPM8 Ca2+ mobilization assay exhibited substantial well-to-well variability, even though such differences were small relative to maximal agonist induced responses. Maximum RFU, cumulative RFU sum, or area under the curve values were extracted from Ca2+ mobilization kinetic data to plot curves and calculate EC50 and IC50 values. Fold over baseline (FOB) ratio data processing eliminated well-to-well differences in resting baseline signals, reduced error bars, improved curve fits and reduced 95 % confidence interval EC50 and IC50 ranges. FOB ratio data processing decreased variability and improved the precision of repeat measurements in single experimental sessions thereby reducing the minimum threshold difference in EC50 or IC50 values required to distinguish compound potencies. EC50 and IC50 values of TRPM8 agonists and antagonists determined in single experiments were strongly aligned to those from multiple independent experiments. Benchmark TRPM8, TRPV1, and TRPA1 EC50 and IC50 values were within the ranges previously reported for agonist and antagonist standards. The improved precision and accuracy of the TRP Ca2+ mobilization assays afforded by FOB ratio data processing enhances their utility for investigating structure activity relationships.
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来源期刊
SLAS Discovery
SLAS Discovery Chemistry-Analytical Chemistry
CiteScore
7.00
自引率
3.20%
发文量
58
审稿时长
39 days
期刊介绍: Advancing Life Sciences R&D: SLAS Discovery reports how scientists develop and utilize novel technologies and/or approaches to provide and characterize chemical and biological tools to understand and treat human disease. SLAS Discovery is a peer-reviewed journal that publishes scientific reports that enable and improve target validation, evaluate current drug discovery technologies, provide novel research tools, and incorporate research approaches that enhance depth of knowledge and drug discovery success. SLAS Discovery emphasizes scientific and technical advances in target identification/validation (including chemical probes, RNA silencing, gene editing technologies); biomarker discovery; assay development; virtual, medium- or high-throughput screening (biochemical and biological, biophysical, phenotypic, toxicological, ADME); lead generation/optimization; chemical biology; and informatics (data analysis, image analysis, statistics, bio- and chemo-informatics). Review articles on target biology, new paradigms in drug discovery and advances in drug discovery technologies. SLAS Discovery is of particular interest to those involved in analytical chemistry, applied microbiology, automation, biochemistry, bioengineering, biomedical optics, biotechnology, bioinformatics, cell biology, DNA science and technology, genetics, information technology, medicinal chemistry, molecular biology, natural products chemistry, organic chemistry, pharmacology, spectroscopy, and toxicology. SLAS Discovery is a member of the Committee on Publication Ethics (COPE) and was published previously (1996-2016) as the Journal of Biomolecular Screening (JBS).
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