微球菌中的线性质粒:对共同祖先和偶联转移的认识

IF 4.3 2区 生物学 Q2 MICROBIOLOGY Environmental microbiology Pub Date : 2025-01-08 DOI:10.1111/1462-2920.70020
María Florencia Perez, Angel Angelov, Maria Übelacker, Gonzalo Arturo Torres Tejerizo, María Eugenia Farias, Wolfgang Liebl, Julián Rafael Dib
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引用次数: 0

摘要

放线菌经常被报道在安第斯普纳山脉,包括菌株属微球菌。这些菌株显示出对高水平紫外线辐射、砷和多种抗生素的耐药性,并具有大的线性质粒。对这些质粒的序列和推测功能进行了比较分析。在所有三种研究的微球菌巨质粒中都存在高序列同一性的大区域(总共超过30 kb),这表明这些元件之间存在明确的进化联系。与基本质粒功能相关的基因主要位于这些保守区域,而与金属和抗生素耐药性相关的基因位于附属区域。此外,大量与转位和重组相关的开放阅读框,以及与平均GC含量的局部偏差,为这些质粒的镶嵌性质和相当大的遗传可塑性提供了证据。这项研究提供了微球菌中线性质粒的共同祖先的证据,并表明水平基因转移可能经常发生在安第斯湖泊中,为本地微生物群落提供了一个有益的基因库,以承受极端条件。此外,通过dna不敏感的偶联型机制成功转移线性质粒pLMA1,并证明了其作为遗传载体的潜在用途。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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Linear Plasmids in Micrococcus: Insights Into a Common Ancestor and Transfer by Conjugation

Actinobacteria have frequently been reported in the Andean Puna, including strains of the genus Micrococcus. These strains demonstrate resistance to high levels of UV radiation, arsenic, and multiple antibiotics, and possess large linear plasmids. A comparative analysis of the sequences and putative functions of these plasmids was conducted. The presence of large regions with high sequence identity (exceeding 30 kb in total) in all three studied Micrococcus megaplasmids indicates a clear evolutionary link among these elements. Genes related to essential plasmid functions were primarily found within these conserved regions, while genes associated with resistance to metals and antibiotics resided in accessory regions. Moreover, the abundance of open reading frames related to transposition and recombination, along with local deviations from the average GC content, provides evidence for the mosaic nature and considerable genetic plasticity of these plasmids. This study presents evidence of a common ancestor for linear plasmids in Micrococcus and suggests that horizontal gene transfer likely occurs frequently within Andean lakes, providing the native microbial community with a beneficial gene pool to withstand extreme conditions. Additionally, the successful transfer of the linear plasmid pLMA1 by a DNase-insensitive, conjugation-type mechanism and its potential use as a genetic vector is demonstrated.

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来源期刊
Environmental microbiology
Environmental microbiology 环境科学-微生物学
CiteScore
9.90
自引率
3.90%
发文量
427
审稿时长
2.3 months
期刊介绍: Environmental Microbiology provides a high profile vehicle for publication of the most innovative, original and rigorous research in the field. The scope of the Journal encompasses the diversity of current research on microbial processes in the environment, microbial communities, interactions and evolution and includes, but is not limited to, the following: the structure, activities and communal behaviour of microbial communities microbial community genetics and evolutionary processes microbial symbioses, microbial interactions and interactions with plants, animals and abiotic factors microbes in the tree of life, microbial diversification and evolution population biology and clonal structure microbial metabolic and structural diversity microbial physiology, growth and survival microbes and surfaces, adhesion and biofouling responses to environmental signals and stress factors modelling and theory development pollution microbiology extremophiles and life in extreme and unusual little-explored habitats element cycles and biogeochemical processes, primary and secondary production microbes in a changing world, microbially-influenced global changes evolution and diversity of archaeal and bacterial viruses new technological developments in microbial ecology and evolution, in particular for the study of activities of microbial communities, non-culturable microorganisms and emerging pathogens
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