{"title":"smCamera:用于单分子数据采集和数据分析的一体化软件包","authors":"Kyung Suk Lee, Taekjip Ha","doi":"10.1007/s40042-024-01243-z","DOIUrl":null,"url":null,"abstract":"<div><p>In the last decades, biological applications of single-molecule methods have grown rapidly and researchers with expertise in microscopy and instrumentation have adopted these techniques and advanced them even further. However, practicing single-molecule methods is still challenging for most because of the need for expensive equipments and instrumentation demands as well as complicated data acquisition and analysis workflow consisting of multiple steps using different software in each of them. smCamera is an all-in-one software package which aims to alleviate steep learning curves of the data acquisition and analysis. From recording movies through extraction of time series of single-molecule fluorescence resonance energy transfer (smFRET), everything can be done in a single program without any additional software or programming languages. Although smCamera has not been published before, it has been distributed to facilitate adaption of smFRET experiments and there has been requests for support for this software. We hope that this work answers questions from researchers using smCamera and also provides an opportunity to introduce and distribute smCamera for new users.</p></div>","PeriodicalId":677,"journal":{"name":"Journal of the Korean Physical Society","volume":"86 1","pages":"1 - 13"},"PeriodicalIF":0.8000,"publicationDate":"2024-12-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1007/s40042-024-01243-z.pdf","citationCount":"0","resultStr":"{\"title\":\"smCamera: all-in-one software package for single-molecule data acquisition and data analysis\",\"authors\":\"Kyung Suk Lee, Taekjip Ha\",\"doi\":\"10.1007/s40042-024-01243-z\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>In the last decades, biological applications of single-molecule methods have grown rapidly and researchers with expertise in microscopy and instrumentation have adopted these techniques and advanced them even further. However, practicing single-molecule methods is still challenging for most because of the need for expensive equipments and instrumentation demands as well as complicated data acquisition and analysis workflow consisting of multiple steps using different software in each of them. smCamera is an all-in-one software package which aims to alleviate steep learning curves of the data acquisition and analysis. From recording movies through extraction of time series of single-molecule fluorescence resonance energy transfer (smFRET), everything can be done in a single program without any additional software or programming languages. Although smCamera has not been published before, it has been distributed to facilitate adaption of smFRET experiments and there has been requests for support for this software. We hope that this work answers questions from researchers using smCamera and also provides an opportunity to introduce and distribute smCamera for new users.</p></div>\",\"PeriodicalId\":677,\"journal\":{\"name\":\"Journal of the Korean Physical Society\",\"volume\":\"86 1\",\"pages\":\"1 - 13\"},\"PeriodicalIF\":0.8000,\"publicationDate\":\"2024-12-06\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://link.springer.com/content/pdf/10.1007/s40042-024-01243-z.pdf\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of the Korean Physical Society\",\"FirstCategoryId\":\"101\",\"ListUrlMain\":\"https://link.springer.com/article/10.1007/s40042-024-01243-z\",\"RegionNum\":4,\"RegionCategory\":\"物理与天体物理\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"PHYSICS, MULTIDISCIPLINARY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of the Korean Physical Society","FirstCategoryId":"101","ListUrlMain":"https://link.springer.com/article/10.1007/s40042-024-01243-z","RegionNum":4,"RegionCategory":"物理与天体物理","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"PHYSICS, MULTIDISCIPLINARY","Score":null,"Total":0}
smCamera: all-in-one software package for single-molecule data acquisition and data analysis
In the last decades, biological applications of single-molecule methods have grown rapidly and researchers with expertise in microscopy and instrumentation have adopted these techniques and advanced them even further. However, practicing single-molecule methods is still challenging for most because of the need for expensive equipments and instrumentation demands as well as complicated data acquisition and analysis workflow consisting of multiple steps using different software in each of them. smCamera is an all-in-one software package which aims to alleviate steep learning curves of the data acquisition and analysis. From recording movies through extraction of time series of single-molecule fluorescence resonance energy transfer (smFRET), everything can be done in a single program without any additional software or programming languages. Although smCamera has not been published before, it has been distributed to facilitate adaption of smFRET experiments and there has been requests for support for this software. We hope that this work answers questions from researchers using smCamera and also provides an opportunity to introduce and distribute smCamera for new users.
期刊介绍:
The Journal of the Korean Physical Society (JKPS) covers all fields of physics spanning from statistical physics and condensed matter physics to particle physics. The manuscript to be published in JKPS is required to hold the originality, significance, and recent completeness. The journal is composed of Full paper, Letters, and Brief sections. In addition, featured articles with outstanding results are selected by the Editorial board and introduced in the online version. For emphasis on aspect of international journal, several world-distinguished researchers join the Editorial board. High quality of papers may be express-published when it is recommended or requested.