{"title":"长叶石竹（Asteraceae, Inuleae）叶绿体全基因组的鉴定与系统发育分析。","authors":"Hui Chen, Tingyu Li, Xinyu Chen, Tianmeng Qu, Xinyi Zheng, Yueguang Wang, Liang Pang, Xianhua Gu, Zhixi Fu","doi":"10.1080/23802359.2024.2444593","DOIUrl":null,"url":null,"abstract":"<p><p>In this study, we studied the complete chloroplast (cp) genome of <i>Carpesium longifolium</i> F. H. Chen & C. M. Hu 1974. The results indicated that the cp genome had a typical circular structure of 151,260 bp in length. A total of 127 genes were identified, including 36 tRNA genes, 8 rRNA genes and 83 protein-coding genes, with the GC content of 37.7%. Phylogenetic analysis revealed the systematic position of <i>C. longifolium</i> is sister to <i>C. cernuum</i> and <i>C. faberi</i>. For the identification and phylogenetics study of the genus, the chloroplast genome sequence of <i>C. longifolium</i> provides a useful genetic resource.</p>","PeriodicalId":18647,"journal":{"name":"Mitochondrial DNA. Part B, Resources","volume":"10 1","pages":"32-36"},"PeriodicalIF":0.5000,"publicationDate":"2024-12-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11703297/pdf/","citationCount":"0","resultStr":"{\"title\":\"Characterization and phylogenetic analysis of the complete chloroplast genome of <i>Carpesium longifolium</i> F. H. Chen & C. M. Hu (Asteraceae, Inuleae).\",\"authors\":\"Hui Chen, Tingyu Li, Xinyu Chen, Tianmeng Qu, Xinyi Zheng, Yueguang Wang, Liang Pang, Xianhua Gu, Zhixi Fu\",\"doi\":\"10.1080/23802359.2024.2444593\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>In this study, we studied the complete chloroplast (cp) genome of <i>Carpesium longifolium</i> F. H. Chen & C. M. Hu 1974. The results indicated that the cp genome had a typical circular structure of 151,260 bp in length. A total of 127 genes were identified, including 36 tRNA genes, 8 rRNA genes and 83 protein-coding genes, with the GC content of 37.7%. Phylogenetic analysis revealed the systematic position of <i>C. longifolium</i> is sister to <i>C. cernuum</i> and <i>C. faberi</i>. For the identification and phylogenetics study of the genus, the chloroplast genome sequence of <i>C. longifolium</i> provides a useful genetic resource.</p>\",\"PeriodicalId\":18647,\"journal\":{\"name\":\"Mitochondrial DNA. Part B, Resources\",\"volume\":\"10 1\",\"pages\":\"32-36\"},\"PeriodicalIF\":0.5000,\"publicationDate\":\"2024-12-23\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11703297/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Mitochondrial DNA. Part B, Resources\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1080/23802359.2024.2444593\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2025/1/1 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"Q4\",\"JCRName\":\"GENETICS & HEREDITY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Mitochondrial DNA. Part B, Resources","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1080/23802359.2024.2444593","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/1/1 0:00:00","PubModel":"eCollection","JCR":"Q4","JCRName":"GENETICS & HEREDITY","Score":null,"Total":0}
引用次数: 0
摘要
在本研究中，我们研究了长叶Carpesium longifolium f.h. Chen和c.m.h Hu 1974的叶绿体全基因组。结果表明，cp基因组具有典型的圆形结构，长度为151,260 bp。共鉴定出127个基因，其中tRNA基因36个，rRNA基因8个，蛋白编码基因83个，GC含量为37.7%。系统发育分析表明，长叶香薷的系统位置是茜草和花香薷的姊妹植物。为该属植物的鉴定和系统发育研究提供了有用的遗传资源。
Characterization and phylogenetic analysis of the complete chloroplast genome of Carpesium longifolium F. H. Chen & C. M. Hu (Asteraceae, Inuleae).
In this study, we studied the complete chloroplast (cp) genome of Carpesium longifolium F. H. Chen & C. M. Hu 1974. The results indicated that the cp genome had a typical circular structure of 151,260 bp in length. A total of 127 genes were identified, including 36 tRNA genes, 8 rRNA genes and 83 protein-coding genes, with the GC content of 37.7%. Phylogenetic analysis revealed the systematic position of C. longifolium is sister to C. cernuum and C. faberi. For the identification and phylogenetics study of the genus, the chloroplast genome sequence of C. longifolium provides a useful genetic resource.
期刊介绍：
This open access journal publishes high-quality and concise research articles reporting the sequence of full mitochondrial genomes, and short communications focusing on the physical, chemical, and biochemical aspects of mtDNA and proteins involved in mtDNA metabolism and interactions.
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