{"title":"半步蛾（半步蛾）叶绿体基因组。[C. A. Mey. 1836]（菊科）及其系统发育分析。","authors":"Chun-Yan Li, Yan-Ping Xing, Wen-Juan Hou, Yu-Tong Huang, Yan-Chang Huang, Yue-Yue Song, Ting-Guo Kang, Yan-Yun Yang, Liang Xu","doi":"10.1080/23802359.2024.2444624","DOIUrl":null,"url":null,"abstract":"<p><p><i>Hemisteptia lyrata</i>, widely distributed in China, has a 152,467 bp chloroplast genome with a large single-copy (LSC) region of 83,473 bp, a small single-copy (SSC) region of 18,594 bp, a pair of inverted repeat regions (IRs) of 25,194 bp in length. The GC content is 36.46%. A total of 133 genes were encoded, of which 88 were protein coding genes, eight were rRNA genes, and 37 were tRNAs. The phylogenetic analysis using the maximum-likelihood method showed that <i>H. lyrata</i> is closely related to the species in <i>Saussurea.</i> This study provides genomic resources for phylogenetic genetics and resource exploitation of <i>H. lyrata</i>.</p>","PeriodicalId":18647,"journal":{"name":"Mitochondrial DNA. Part B, Resources","volume":"10 1","pages":"6-10"},"PeriodicalIF":0.5000,"publicationDate":"2024-12-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11703484/pdf/","citationCount":"0","resultStr":"{\"title\":\"The complete chloroplast genome of <i>Hemisteptia lyrata</i> (Bunge) Fisch. & C. A. Mey. 1836 (Asteraceae) and its phylogenetic analysis.\",\"authors\":\"Chun-Yan Li, Yan-Ping Xing, Wen-Juan Hou, Yu-Tong Huang, Yan-Chang Huang, Yue-Yue Song, Ting-Guo Kang, Yan-Yun Yang, Liang Xu\",\"doi\":\"10.1080/23802359.2024.2444624\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p><i>Hemisteptia lyrata</i>, widely distributed in China, has a 152,467 bp chloroplast genome with a large single-copy (LSC) region of 83,473 bp, a small single-copy (SSC) region of 18,594 bp, a pair of inverted repeat regions (IRs) of 25,194 bp in length. The GC content is 36.46%. A total of 133 genes were encoded, of which 88 were protein coding genes, eight were rRNA genes, and 37 were tRNAs. The phylogenetic analysis using the maximum-likelihood method showed that <i>H. lyrata</i> is closely related to the species in <i>Saussurea.</i> This study provides genomic resources for phylogenetic genetics and resource exploitation of <i>H. lyrata</i>.</p>\",\"PeriodicalId\":18647,\"journal\":{\"name\":\"Mitochondrial DNA. Part B, Resources\",\"volume\":\"10 1\",\"pages\":\"6-10\"},\"PeriodicalIF\":0.5000,\"publicationDate\":\"2024-12-23\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11703484/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Mitochondrial DNA. Part B, Resources\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1080/23802359.2024.2444624\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2025/1/1 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"Q4\",\"JCRName\":\"GENETICS & HEREDITY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Mitochondrial DNA. Part B, Resources","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1080/23802359.2024.2444624","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/1/1 0:00:00","PubModel":"eCollection","JCR":"Q4","JCRName":"GENETICS & HEREDITY","Score":null,"Total":0}
The complete chloroplast genome of Hemisteptia lyrata (Bunge) Fisch. & C. A. Mey. 1836 (Asteraceae) and its phylogenetic analysis.
Hemisteptia lyrata, widely distributed in China, has a 152,467 bp chloroplast genome with a large single-copy (LSC) region of 83,473 bp, a small single-copy (SSC) region of 18,594 bp, a pair of inverted repeat regions (IRs) of 25,194 bp in length. The GC content is 36.46%. A total of 133 genes were encoded, of which 88 were protein coding genes, eight were rRNA genes, and 37 were tRNAs. The phylogenetic analysis using the maximum-likelihood method showed that H. lyrata is closely related to the species in Saussurea. This study provides genomic resources for phylogenetic genetics and resource exploitation of H. lyrata.
期刊介绍：
This open access journal publishes high-quality and concise research articles reporting the sequence of full mitochondrial genomes, and short communications focusing on the physical, chemical, and biochemical aspects of mtDNA and proteins involved in mtDNA metabolism and interactions.
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