宁夏黄河流域枸杞新种枸杞（枸杞科）叶绿体全基因组序列研究。

IF 0.5 4区生物学 Q4 GENETICS & HEREDITY Mitochondrial DNA. Part B, Resources Pub Date : 2024-12-23 eCollection Date: 2025-01-01 DOI:10.1080/23802359.2024.2444598

Bo Zhang, Wangsuo Liu, Darifu Ba, Zhiguo Jiang

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引用次数: 0

摘要

枸杞（Lycium barbarum var. implicatum, 2010）是茄科枸杞属植物的新变种。在这里，我们测序、组装和注释了L. barbarum var. implicatum的完整叶绿体（cp）基因组。结果表明，隐斑L. barbarum var. implicatum的cp全基因组长度为154,888 bp，其中包含85,894 bp的大单拷贝（large single copy， LSC）区、25,393 bp的一对倒置重复（inverted repeats， IR）区和18,208 bp的小单拷贝（small single copy， SSC）区。最大似然树（ML）系统发育树分析结果表明，隐型枸杞是枸杞的姊妹品种。本研究结果为今后茄科植物的系统发育研究提供了有益的信息。

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The complete chloroplast genome sequence of Lycium barbarum var. implicatum (Solanaceae), a new species of wolfberry from the Yellow River Basin in Ningxia, China.

Lycium barbarum var. implicatum (2010), is a new variety of L. barbarum in Solanaceae. Here, we sequenced, assembled, and annotated the complete chloroplast (cp) genome of L. barbarum var. implicatum. Results showed that the complete cp genome of L. barbarum var. implicatum was 154,888 bp in length, containing a large single copy (LSC) region of 85,894 bp, a pair of inverted repeats (IR) region of 25,393 bp, and a small single copy (SSC) region of 18,208 bp. Maximum-likelihood (ML) phylogenetic tree elucidated that L. barbarum var. implicatum was sister to L. ruthenicum. Our results provide useful information for future phylogenetic studies in the family of Solanaceae.

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来源期刊

Mitochondrial DNA. Part B, Resources Biochemistry, Genetics and Molecular Biology-Molecular Biology

CiteScore

1.30

自引率

20.00%

发文量

670

期刊介绍： This open access journal publishes high-quality and concise research articles reporting the sequence of full mitochondrial genomes, and short communications focusing on the physical, chemical, and biochemical aspects of mtDNA and proteins involved in mtDNA metabolism and interactions.