L O Ferro, J D P Bezerra, T M da Silva, C S de Oliveira, S Dos S Nascimento, L M Paiva, X Fan, P W Crous, C M Souza-Motta
{"title":"内生孢子:来自巴西的种。","authors":"L O Ferro, J D P Bezerra, T M da Silva, C S de Oliveira, S Dos S Nascimento, L M Paiva, X Fan, P W Crous, C M Souza-Motta","doi":"10.3114/fuse.2024.14.16","DOIUrl":null,"url":null,"abstract":"<p><p><b></b> <i>Diaporthe</i> species can inhabit various hosts with different lifestyles and live as endophytes, pathogens, and saprobes. Our study analysed 180 endophytic <i>Diaporthe</i> isolates from <i>Miconia</i> sp. in the Atlantic Forest, <i>Brosimum gaudichaudii</i> in the Brazilian savanna (Cerrado), and <i>Anacardium occidentale</i> in the Caatinga forest and Cerrado in Brazil. Based on multi-locus phylogenetic analyses [β-tubulin (<i>tub2</i>), internal transcribed spacer regions and intervening 5.8S rRNA (ITS), translation elongation factor 1-alpha (<i>tef1</i>), calmodulin (<i>cmdA</i>), and histone (<i>his3</i>)] and morphological features, we are introducing seven new species (<i>D. azevedoi</i>, <i>D. catimbauensis</i>, <i>D. coracoralinae</i>, <i>D. luizorum</i>, <i>D. pedratalhadensis</i>, <i>D. samambaiaensis</i>, and <i>D. vargemgrandensis</i>) and reporting seven known species (<i>D. fructicola</i>, <i>D. inconspicua</i>, <i>D. infertilis</i>, <i>D. paranensis</i>, <i>D. raonikayaporum</i>, <i>D. schini</i>, and <i>D. ueckeri</i>). We also included a morphological description of <i>D. infertilis</i> and synonymised <i>D. lutescens</i>, <i>D. pseudoinconspicua</i>, and <i>D. samaneae</i> under <i>D. inconspicua</i>; <i>D. neoraonikayoporum</i> under <i>D. raonikayaporum</i>; and <i>D. passifloricola</i>, <i>D. rosae</i>, and <i>D. vochysiae</i> under <i>D. ueckeri</i>, based on limited nucleotide differences among DNA sequence data and overlapping morphological features. Our results highlight the importance of including endophytic isolates in the phylogeny of <i>Diaporthe</i>, and show how these data expand the geographic distribution and host relationships of known species. <b>Citation:</b> Ferro LO, Bezerra JDP, da Silva TM, de Oliveira CS, Nascimento SS, Paiva LM, Fan X, Crous PW, Souza-Motta CM (2024). Endophytic <i>Diaporthe</i> species from Brazil. <i>Fungal Systematics and Evolution</i> <b>14</b>: 251-269. doi: 10.3114/fuse.2024.14.16.</p>","PeriodicalId":73121,"journal":{"name":"Fungal systematics and evolution","volume":"14 ","pages":"251-269"},"PeriodicalIF":0.0000,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11736253/pdf/","citationCount":"0","resultStr":"{\"title\":\"Endophytic <i>Diaporthe</i> species from Brazil.\",\"authors\":\"L O Ferro, J D P Bezerra, T M da Silva, C S de Oliveira, S Dos S Nascimento, L M Paiva, X Fan, P W Crous, C M Souza-Motta\",\"doi\":\"10.3114/fuse.2024.14.16\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p><b></b> <i>Diaporthe</i> species can inhabit various hosts with different lifestyles and live as endophytes, pathogens, and saprobes. Our study analysed 180 endophytic <i>Diaporthe</i> isolates from <i>Miconia</i> sp. in the Atlantic Forest, <i>Brosimum gaudichaudii</i> in the Brazilian savanna (Cerrado), and <i>Anacardium occidentale</i> in the Caatinga forest and Cerrado in Brazil. Based on multi-locus phylogenetic analyses [β-tubulin (<i>tub2</i>), internal transcribed spacer regions and intervening 5.8S rRNA (ITS), translation elongation factor 1-alpha (<i>tef1</i>), calmodulin (<i>cmdA</i>), and histone (<i>his3</i>)] and morphological features, we are introducing seven new species (<i>D. azevedoi</i>, <i>D. catimbauensis</i>, <i>D. coracoralinae</i>, <i>D. luizorum</i>, <i>D. pedratalhadensis</i>, <i>D. samambaiaensis</i>, and <i>D. vargemgrandensis</i>) and reporting seven known species (<i>D. fructicola</i>, <i>D. inconspicua</i>, <i>D. infertilis</i>, <i>D. paranensis</i>, <i>D. raonikayaporum</i>, <i>D. schini</i>, and <i>D. ueckeri</i>). We also included a morphological description of <i>D. infertilis</i> and synonymised <i>D. lutescens</i>, <i>D. pseudoinconspicua</i>, and <i>D. samaneae</i> under <i>D. inconspicua</i>; <i>D. neoraonikayoporum</i> under <i>D. raonikayaporum</i>; and <i>D. passifloricola</i>, <i>D. rosae</i>, and <i>D. vochysiae</i> under <i>D. ueckeri</i>, based on limited nucleotide differences among DNA sequence data and overlapping morphological features. Our results highlight the importance of including endophytic isolates in the phylogeny of <i>Diaporthe</i>, and show how these data expand the geographic distribution and host relationships of known species. <b>Citation:</b> Ferro LO, Bezerra JDP, da Silva TM, de Oliveira CS, Nascimento SS, Paiva LM, Fan X, Crous PW, Souza-Motta CM (2024). Endophytic <i>Diaporthe</i> species from Brazil. <i>Fungal Systematics and Evolution</i> <b>14</b>: 251-269. doi: 10.3114/fuse.2024.14.16.</p>\",\"PeriodicalId\":73121,\"journal\":{\"name\":\"Fungal systematics and evolution\",\"volume\":\"14 \",\"pages\":\"251-269\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2024-12-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11736253/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Fungal systematics and evolution\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.3114/fuse.2024.14.16\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/8/2 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Fungal systematics and evolution","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.3114/fuse.2024.14.16","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/8/2 0:00:00","PubModel":"Epub","JCR":"","JCRName":"","Score":null,"Total":0}
Diaporthe species can inhabit various hosts with different lifestyles and live as endophytes, pathogens, and saprobes. Our study analysed 180 endophytic Diaporthe isolates from Miconia sp. in the Atlantic Forest, Brosimum gaudichaudii in the Brazilian savanna (Cerrado), and Anacardium occidentale in the Caatinga forest and Cerrado in Brazil. Based on multi-locus phylogenetic analyses [β-tubulin (tub2), internal transcribed spacer regions and intervening 5.8S rRNA (ITS), translation elongation factor 1-alpha (tef1), calmodulin (cmdA), and histone (his3)] and morphological features, we are introducing seven new species (D. azevedoi, D. catimbauensis, D. coracoralinae, D. luizorum, D. pedratalhadensis, D. samambaiaensis, and D. vargemgrandensis) and reporting seven known species (D. fructicola, D. inconspicua, D. infertilis, D. paranensis, D. raonikayaporum, D. schini, and D. ueckeri). We also included a morphological description of D. infertilis and synonymised D. lutescens, D. pseudoinconspicua, and D. samaneae under D. inconspicua; D. neoraonikayoporum under D. raonikayaporum; and D. passifloricola, D. rosae, and D. vochysiae under D. ueckeri, based on limited nucleotide differences among DNA sequence data and overlapping morphological features. Our results highlight the importance of including endophytic isolates in the phylogeny of Diaporthe, and show how these data expand the geographic distribution and host relationships of known species. Citation: Ferro LO, Bezerra JDP, da Silva TM, de Oliveira CS, Nascimento SS, Paiva LM, Fan X, Crous PW, Souza-Motta CM (2024). Endophytic Diaporthe species from Brazil. Fungal Systematics and Evolution14: 251-269. doi: 10.3114/fuse.2024.14.16.