血清n -糖组学与纳米lc - qtof LC-MS/MS揭示了胶质母细胞瘤、脑膜瘤和高级别脑膜瘤的n -聚糖生物标志物。

IF 3.8 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS Journal of Proteome Research Pub Date : 2025-03-07 Epub Date: 2025-02-05 DOI:10.1021/acs.jproteome.4c01090
Atit Silsirivanit, Michael Russelle S Alvarez, Sheryl Joyce Grijaldo-Alvarez, Riya Gogte, Amnat Kitkhuandee, Nontaphon Piyawattanametha, Wunchana Seubwai, Sukanya Luang, Orasa Panawan, Panupong Mahalapbutr, Kulthida Vaeteewoottacharn, Kanlayanee Sawanyawisuth, Worachart Let-Itthiporn, Charupong Saengboonmee, Pichayen Duangthongphon, Kritsakorn Jingjit, Anuchit Pankongsap, Sakda Waraasawapati, Chaiwat Aphivatanasiri, Carlito B Lebrilla
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引用次数: 0

摘要

癌细胞中糖基化的改变导致肿瘤相关聚糖的表达,可作为疾病诊断和预后预测的生物标志物。在这项研究中,我们使用纳米lc - qtof鉴定血清n -聚糖生物标志物,用于检测脑肿瘤。我们观察到,与健康个体相比,胶质母细胞瘤(GBM)和脑膜瘤(MG)患者血清中唾液化n -聚糖增加,聚焦化n -聚糖减少。在GBM中,血清唾液化n -聚糖(6_4_0_2化合物)升高和聚焦化n -聚糖(4_4_1_0化合物)降低的组合被确定为最合适的面板,曲线下面积(AUC)为0.8660,灵敏度为78.95%,特异性为84.21%,准确性为82.89%。对于MG, 6_6_2_0和5_5_2_0化合物减少和4_4_1_1化合物增加的组合诊断MG的AUC为0.9260,敏感性为82.35%,特异性为78.57%,准确性为80.26%。此外,5_5_1_0和4_3_0_0化合物的增加以及7_7_4_3的减少与高级别MG (WHO分级II-III)相关。总之,我们确定了与脑肿瘤相关的血清n -聚糖谱,强调了它们作为这些疾病诊断和预后的生物标志物的潜力。
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Serum N-Glycomics with Nano-LC-QToF LC-MS/MS Reveals N-Glycan Biomarkers for Glioblastoma, Meningioma, and High-Grade Meningioma.

Alteration of glycosylation in cancer cells leads to the expression of tumor-associated glycans, which can be used as biomarkers for diagnosis and prognostic prediction of diseases. In this study, we used nano-LC-QToF to identify serum N-glycan biomarkers for the detection of brain tumors. We observed an increase in sialylated N-glycans and a decrease in fucosylated N-glycans in the serum of patients with glioblastoma (GBM) and meningioma (MG) compared to healthy individuals. In GBM, a combination of increased serum sialylated N-glycan (6_4_0_2 compound) and decreased fucosylated N-glycan (4_4_1_0 compound) was identified as the most appropriate panel, with an area under the curve (AUC) of 0.8660, 78.95% sensitivity, 84.21% specificity, and 82.89% accuracy. For MG, a combination of decreased 6_6_2_0 and 5_5_2_0 compounds and increased 4_4_1_1 compound achieved an AUC of 0.9260, 82.35% sensitivity, 78.57% specificity, and 80.26% accuracy for diagnosis of MG. Additionally, an increase in 5_5_1_0 and 4_3_0_0 compounds combined with a decrease in 7_7_4_3 was associated with high-grade MG (WHO grades II-III). In conclusion, we identified serum N-glycan profiles associated with brain tumors, highlighting their potential as biomarkers for the diagnosis and prognosis of these diseases.

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来源期刊
Journal of Proteome Research
Journal of Proteome Research 生物-生化研究方法
CiteScore
9.00
自引率
4.50%
发文量
251
审稿时长
3 months
期刊介绍: Journal of Proteome Research publishes content encompassing all aspects of global protein analysis and function, including the dynamic aspects of genomics, spatio-temporal proteomics, metabonomics and metabolomics, clinical and agricultural proteomics, as well as advances in methodology including bioinformatics. The theme and emphasis is on a multidisciplinary approach to the life sciences through the synergy between the different types of "omics".
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