一种新的合成酵母群落看到了曙光。

IF 5.4 1区 生物学 Q1 MICROBIOLOGY mBio Pub Date : 2025-03-12 Epub Date: 2025-02-06 DOI:10.1128/mbio.02008-23
Vicente Rojas, Daniela Rivera, Carlos Ruiz, Luis F Larrondo
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引用次数: 0

摘要

没有任何生物是孤岛:具有不同分类复杂性的生物,包括单个物种的遗传变异,可以在特定的生态位中共存,为生存而合作,同时争夺环境资源。近年来,合成生物学策略见证了大量的努力集中在创造人工微生物群落,以解决有关自然系统复杂性和支撑它们的相互作用的紧迫问题。这些工程生态系统取决于其成员的数量和性质,允许复杂的细胞通信设计重新创建和创造各种感兴趣的相互作用。由于其实验简单,出芽酵母酿酒酵母已被利用来建立不同细胞群的混合物,具有探索合成生态学,代谢生物加工,生物传感和模式形成的潜力。事实上,工程酵母群落使先进的分子检测动力学和逻辑操作成为可能。在这里,我们简要概述了最新的技术,重点介绍了利用光遗传学通过光刺激在群落水平上以前所未有的空间和时间调节来操纵关键酵母表型的例子。因此,我们展望了一个光明的未来,光遗传学方法在合成群落(光生态学)中的应用阐明了复杂生态系统的复杂动态,并推动了代谢工程策略的创新。
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A new flavor of synthetic yeast communities sees the light.

No organism is an island: organisms of varying taxonomic complexity, including genetic variants of a single species, can coexist in particular niches, cooperating for survival while simultaneously competing for environmental resources. In recent years, synthetic biology strategies have witnessed a surge of efforts focused on creating artificial microbial communities to tackle pressing questions about the complexity of natural systems and the interactions that underpin them. These engineered ecosystems depend on the number and nature of their members, allowing complex cell communication designs to recreate and create diverse interactions of interest. Due to its experimental simplicity, the budding yeast Saccharomyces cerevisiae has been harnessed to establish a mixture of varied cell populations with the potential to explore synthetic ecology, metabolic bioprocessing, biosensing, and pattern formation. Indeed, engineered yeast communities enable advanced molecule detection dynamics and logic operations. Here, we present a concise overview of the state-of-the-art, highlighting examples that exploit optogenetics to manipulate, through light stimulation, key yeast phenotypes at the community level, with unprecedented spatial and temporal regulation. Hence, we envision a bright future where the application of optogenetic approaches in synthetic communities (optoecology) illuminates the intricate dynamics of complex ecosystems and drives innovations in metabolic engineering strategies.

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来源期刊
mBio
mBio MICROBIOLOGY-
CiteScore
10.50
自引率
3.10%
发文量
762
审稿时长
1 months
期刊介绍: mBio® is ASM''s first broad-scope, online-only, open access journal. mBio offers streamlined review and publication of the best research in microbiology and allied fields.
期刊最新文献
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