利用苯并噻吩实验吸收和发射光谱设计荧光有机聚合物化学空间:机器学习探索。

IF 3.1 4区 化学 Q2 BIOCHEMICAL RESEARCH METHODS Journal of Fluorescence Pub Date : 2025-09-01 Epub Date: 2025-02-10 DOI:10.1007/s10895-025-04155-8
Shaimaa H Mallah, Azal S Waheeb, Abrar U Hassan, Masar A Awad, Ayad R Jalfan, Ashraf Y Elnaggar, Islam H El Azab, Mohamed H H Mahmoud
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引用次数: 0

摘要

在这项研究中,提出了一种利用机器学习技术设计基于苯二噻吩(BDT)发色团的新型荧光有机聚合物的方法。为此,从文献中得到BDT发色团,以及它们对应的λe。通过快速发现试剂盒(RDKit),它们的分子描述符被设计为使用ML模型来预测它们的λmax和λe性质。在评价的模型中,线性回归、随机森林和决策树模型表现最好,R²值在0.96 ~ 0.98之间。他们对SHapley加性解释(SHAP)值的分析表明,Labute可达表面积(ASA)和可旋转键的数量可能是影响其性能的最具影响力的特征。利用这些见解,他们设计了5000种新聚合物,其预测λe延伸至987 nm。前1000个聚合物的最高合成可达性似然指数(SALI)得分高达3.21,表明其可达性。这项工作不仅促进了对BDT基材料的理解,而且可以为设计新的荧光聚合物提供一个框架。
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Curating Benzothiophene Experimental Absorption and Emission Spectra to Design Fluorescent Organic Polymer Chemical Space: A Machine Learning Quest.

In this study, an approach to design new fluorescent organic polymers based on benzodithiophene (BDT) chromophores are presented by utilizing machine learning (ML) techniques. For this, the BDT chromophores, from the literature, along with their corresponding λe. by using Rapid Discovery Kit (RDKit), their molecular descriptors are designed to employ ML models for predicting their λmax and λe properties. Among the evaluated models, Linear Regression, Random Forest and Decision Tree models demonstrate the best performance, achieving R² values between 0.96 and 0.98. Their analysis of SHapley Additive exPlanations (SHAP) values reveals that the Labute Accessible Surface Area (ASA) and the number of Rotatable Bonds can be the most influential features to impact their performance. Leveraging these insights, their 5,000 new polymers are designed with their predicted λe extending up to 987 nm. Their highest Synthetic Accessibility Likelihood Index (SALI) scores for the top 1,000 polymers reaches up to 3.21 to indicate their accessibility for synthesis. This work not only advances the understanding of BDT -based materials but can also provide a framework for designing of new fluorescent polymers.

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来源期刊
Journal of Fluorescence
Journal of Fluorescence 化学-分析化学
CiteScore
4.60
自引率
7.40%
发文量
203
审稿时长
5.4 months
期刊介绍: Journal of Fluorescence is an international forum for the publication of peer-reviewed original articles that advance the practice of this established spectroscopic technique. Topics covered include advances in theory/and or data analysis, studies of the photophysics of aromatic molecules, solvent, and environmental effects, development of stationary or time-resolved measurements, advances in fluorescence microscopy, imaging, photobleaching/recovery measurements, and/or phosphorescence for studies of cell biology, chemical biology and the advanced uses of fluorescence in flow cytometry/analysis, immunology, high throughput screening/drug discovery, DNA sequencing/arrays, genomics and proteomics. Typical applications might include studies of macromolecular dynamics and conformation, intracellular chemistry, and gene expression. The journal also publishes papers that describe the synthesis and characterization of new fluorophores, particularly those displaying unique sensitivities and/or optical properties. In addition to original articles, the Journal also publishes reviews, rapid communications, short communications, letters to the editor, topical news articles, and technical and design notes.
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