Masaaki Takahashi, Yasushi Kawasaki, Hiroki Naito, Unseok Lee, Koichi Yoshi
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Datasets for two different prediction periods after anthesis of three tomato cultivars (\"CF Momotaro York,\" \"Zayda,\" and \"Adventure.\") were used to develop tomato size prediction models, and their performance was evaluated. We also aimed to improve the model adding the average temperature during the prediction period as an explanatory variable. When the estimated fruit size data at cumulative temperatures of 200°C d, 300°C d, and 500°C d after anthesis were used as explanatory variables, the mean absolute percentage error (MAPE) was lowest for \"Zayda,\" a cultivar with stable fruit diameter, at 9.8% for Ridge Regression. When the estimated fruit size at cumulative temperatures of 300°C d, 500°C d, and 800°C d after anthesis were used as explanatory variables for Ridge Regression, the MAPE decreased for all cultivars: 10.1% for \"CF Momotaro York,\" 8.8% for \"Zayda,\" and 10.0% for \"Adventure.\" In addition, incorporating the average temperature during the fruit size prediction period as an explanatory variable slightly increased model performance. These results indicate that this method could effectively predict tomato size at harvest in three cultivars. If fruit diameter data acquisition could be automated or simplified, it would assist in cultivation management, such as tomato thinning.</p>","PeriodicalId":12632,"journal":{"name":"Frontiers in Plant Science","volume":"16 ","pages":"1516255"},"PeriodicalIF":5.9000,"publicationDate":"2025-01-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11813907/pdf/","citationCount":"0","resultStr":"{\"title\":\"Fruit size prediction of tomato cultivars using machine learning algorithms.\",\"authors\":\"Masaaki Takahashi, Yasushi Kawasaki, Hiroki Naito, Unseok Lee, Koichi Yoshi\",\"doi\":\"10.3389/fpls.2025.1516255\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Early fruit size prediction in greenhouse tomato (<i>Solanum lycopersicum</i> L.) is crucial for growers managing cultivars to reduce the yield ratio of small-sized fruit and for stakeholders in the horticultural supply chain. We aimed to develop a method for early prediction of tomato fruit size at harvest with machine learning algorithm, and three machine learning models (Ridge Regression, Extra Tree Regrreion, CatBoost Regression) were compared using the PyCaret package for Python. For constructing the models, the fruit weight estimated from the fruit diameter obtained over time for each cumulative temperature after anthesis was used as explanatory variable and the fruit weight at harvest was used as objective variable. Datasets for two different prediction periods after anthesis of three tomato cultivars (\\\"CF Momotaro York,\\\" \\\"Zayda,\\\" and \\\"Adventure.\\\") were used to develop tomato size prediction models, and their performance was evaluated. We also aimed to improve the model adding the average temperature during the prediction period as an explanatory variable. When the estimated fruit size data at cumulative temperatures of 200°C d, 300°C d, and 500°C d after anthesis were used as explanatory variables, the mean absolute percentage error (MAPE) was lowest for \\\"Zayda,\\\" a cultivar with stable fruit diameter, at 9.8% for Ridge Regression. When the estimated fruit size at cumulative temperatures of 300°C d, 500°C d, and 800°C d after anthesis were used as explanatory variables for Ridge Regression, the MAPE decreased for all cultivars: 10.1% for \\\"CF Momotaro York,\\\" 8.8% for \\\"Zayda,\\\" and 10.0% for \\\"Adventure.\\\" In addition, incorporating the average temperature during the fruit size prediction period as an explanatory variable slightly increased model performance. These results indicate that this method could effectively predict tomato size at harvest in three cultivars. 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引用次数: 0
摘要
温室番茄(Solanum lycopersicum L.)的早期果实大小预测对于种植者管理品种以降低小尺寸果实的产出率和园艺供应链中的利益相关者至关重要。我们的目标是开发一种机器学习算法在收获时早期预测番茄果实大小的方法,并使用Python的PyCaret包比较了三种机器学习模型(Ridge Regression, Extra Tree Regression, CatBoost Regression)。在构建模型时,以开花后每个积温下果实直径随时间的变化估计的果实重为解释变量,收获时的果实重为客观变量。利用3个番茄品种(“CF Momotaro York”、“Zayda”和“Adventure”)开花后2个不同预测期的数据集,建立了番茄大小预测模型,并对其性能进行了评价。在模型中加入预测期的平均温度作为解释变量,对模型进行了改进。以开花后200℃、300℃和500℃累积温度下的估计果实大小数据作为解释变量时,果实直径稳定的品种“扎伊达”的平均绝对百分比误差(MAPE)最低,为9.8%。当将开花后300、500和800℃累积温度下的果实大小作为岭回归的解释变量时,所有品种的MAPE都下降了:“CF Momotaro York”下降了10.1%,“Zayda”下降了8.8%,“Adventure”下降了10.0%。此外,将果实大小预测期的平均温度作为解释变量,模型的性能略有提高。结果表明,该方法能有效预测3个品种的番茄收获期大小。如果果实直径数据的采集可以自动化或简化,它将有助于栽培管理,如番茄减薄。
Fruit size prediction of tomato cultivars using machine learning algorithms.
Early fruit size prediction in greenhouse tomato (Solanum lycopersicum L.) is crucial for growers managing cultivars to reduce the yield ratio of small-sized fruit and for stakeholders in the horticultural supply chain. We aimed to develop a method for early prediction of tomato fruit size at harvest with machine learning algorithm, and three machine learning models (Ridge Regression, Extra Tree Regrreion, CatBoost Regression) were compared using the PyCaret package for Python. For constructing the models, the fruit weight estimated from the fruit diameter obtained over time for each cumulative temperature after anthesis was used as explanatory variable and the fruit weight at harvest was used as objective variable. Datasets for two different prediction periods after anthesis of three tomato cultivars ("CF Momotaro York," "Zayda," and "Adventure.") were used to develop tomato size prediction models, and their performance was evaluated. We also aimed to improve the model adding the average temperature during the prediction period as an explanatory variable. When the estimated fruit size data at cumulative temperatures of 200°C d, 300°C d, and 500°C d after anthesis were used as explanatory variables, the mean absolute percentage error (MAPE) was lowest for "Zayda," a cultivar with stable fruit diameter, at 9.8% for Ridge Regression. When the estimated fruit size at cumulative temperatures of 300°C d, 500°C d, and 800°C d after anthesis were used as explanatory variables for Ridge Regression, the MAPE decreased for all cultivars: 10.1% for "CF Momotaro York," 8.8% for "Zayda," and 10.0% for "Adventure." In addition, incorporating the average temperature during the fruit size prediction period as an explanatory variable slightly increased model performance. These results indicate that this method could effectively predict tomato size at harvest in three cultivars. If fruit diameter data acquisition could be automated or simplified, it would assist in cultivation management, such as tomato thinning.
期刊介绍:
In an ever changing world, plant science is of the utmost importance for securing the future well-being of humankind. Plants provide oxygen, food, feed, fibers, and building materials. In addition, they are a diverse source of industrial and pharmaceutical chemicals. Plants are centrally important to the health of ecosystems, and their understanding is critical for learning how to manage and maintain a sustainable biosphere. Plant science is extremely interdisciplinary, reaching from agricultural science to paleobotany, and molecular physiology to ecology. It uses the latest developments in computer science, optics, molecular biology and genomics to address challenges in model systems, agricultural crops, and ecosystems. Plant science research inquires into the form, function, development, diversity, reproduction, evolution and uses of both higher and lower plants and their interactions with other organisms throughout the biosphere. Frontiers in Plant Science welcomes outstanding contributions in any field of plant science from basic to applied research, from organismal to molecular studies, from single plant analysis to studies of populations and whole ecosystems, and from molecular to biophysical to computational approaches.
Frontiers in Plant Science publishes articles on the most outstanding discoveries across a wide research spectrum of Plant Science. The mission of Frontiers in Plant Science is to bring all relevant Plant Science areas together on a single platform.