Paolo Pegolo, Enrico Drigo, Federico Grasselli, Stefano Baroni
{"title":"平衡分子动力学的输运系数。","authors":"Paolo Pegolo, Enrico Drigo, Federico Grasselli, Stefano Baroni","doi":"10.1063/5.0249677","DOIUrl":null,"url":null,"abstract":"<p><p>The determination of transport coefficients through the time-honored Green-Kubo theory of linear response and equilibrium molecular dynamics requires significantly longer simulation times than those of equilibrium properties while being further hindered by the lack of well-established data-analysis techniques to evaluate the statistical accuracy of the results. Leveraging recent advances in the spectral analysis of the current time series associated with molecular trajectories, we introduce a new method to estimate the full (diagonal as well as off-diagonal) Onsager matrix of transport coefficients from a single statistical model. This approach, based on the knowledge of the statistical distribution of the Onsager-matrix samples in the frequency domain, unifies the evaluation of diagonal (conductivities and viscosities) and off-diagonal (e.g., thermoelectric) transport coefficients within a comprehensive framework, significantly improving the reliability of transport coefficient estimation for materials ranging from molten salts to solid-state electrolytes. We validate the accuracy of this method against existing approaches using benchmark data on molten cesium fluoride and liquid water and conclude our presentation with the computation of various transport coefficients of the Li3PS4 solid-state electrolyte.</p>","PeriodicalId":15313,"journal":{"name":"Journal of Chemical Physics","volume":"162 6","pages":""},"PeriodicalIF":3.1000,"publicationDate":"2025-02-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Transport coefficients from equilibrium molecular dynamics.\",\"authors\":\"Paolo Pegolo, Enrico Drigo, Federico Grasselli, Stefano Baroni\",\"doi\":\"10.1063/5.0249677\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>The determination of transport coefficients through the time-honored Green-Kubo theory of linear response and equilibrium molecular dynamics requires significantly longer simulation times than those of equilibrium properties while being further hindered by the lack of well-established data-analysis techniques to evaluate the statistical accuracy of the results. Leveraging recent advances in the spectral analysis of the current time series associated with molecular trajectories, we introduce a new method to estimate the full (diagonal as well as off-diagonal) Onsager matrix of transport coefficients from a single statistical model. This approach, based on the knowledge of the statistical distribution of the Onsager-matrix samples in the frequency domain, unifies the evaluation of diagonal (conductivities and viscosities) and off-diagonal (e.g., thermoelectric) transport coefficients within a comprehensive framework, significantly improving the reliability of transport coefficient estimation for materials ranging from molten salts to solid-state electrolytes. We validate the accuracy of this method against existing approaches using benchmark data on molten cesium fluoride and liquid water and conclude our presentation with the computation of various transport coefficients of the Li3PS4 solid-state electrolyte.</p>\",\"PeriodicalId\":15313,\"journal\":{\"name\":\"Journal of Chemical Physics\",\"volume\":\"162 6\",\"pages\":\"\"},\"PeriodicalIF\":3.1000,\"publicationDate\":\"2025-02-14\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Chemical Physics\",\"FirstCategoryId\":\"92\",\"ListUrlMain\":\"https://doi.org/10.1063/5.0249677\",\"RegionNum\":2,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"CHEMISTRY, PHYSICAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Chemical Physics","FirstCategoryId":"92","ListUrlMain":"https://doi.org/10.1063/5.0249677","RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"CHEMISTRY, PHYSICAL","Score":null,"Total":0}
Transport coefficients from equilibrium molecular dynamics.
The determination of transport coefficients through the time-honored Green-Kubo theory of linear response and equilibrium molecular dynamics requires significantly longer simulation times than those of equilibrium properties while being further hindered by the lack of well-established data-analysis techniques to evaluate the statistical accuracy of the results. Leveraging recent advances in the spectral analysis of the current time series associated with molecular trajectories, we introduce a new method to estimate the full (diagonal as well as off-diagonal) Onsager matrix of transport coefficients from a single statistical model. This approach, based on the knowledge of the statistical distribution of the Onsager-matrix samples in the frequency domain, unifies the evaluation of diagonal (conductivities and viscosities) and off-diagonal (e.g., thermoelectric) transport coefficients within a comprehensive framework, significantly improving the reliability of transport coefficient estimation for materials ranging from molten salts to solid-state electrolytes. We validate the accuracy of this method against existing approaches using benchmark data on molten cesium fluoride and liquid water and conclude our presentation with the computation of various transport coefficients of the Li3PS4 solid-state electrolyte.
期刊介绍:
The Journal of Chemical Physics publishes quantitative and rigorous science of long-lasting value in methods and applications of chemical physics. The Journal also publishes brief Communications of significant new findings, Perspectives on the latest advances in the field, and Special Topic issues. The Journal focuses on innovative research in experimental and theoretical areas of chemical physics, including spectroscopy, dynamics, kinetics, statistical mechanics, and quantum mechanics. In addition, topical areas such as polymers, soft matter, materials, surfaces/interfaces, and systems of biological relevance are of increasing importance.
Topical coverage includes:
Theoretical Methods and Algorithms
Advanced Experimental Techniques
Atoms, Molecules, and Clusters
Liquids, Glasses, and Crystals
Surfaces, Interfaces, and Materials
Polymers and Soft Matter
Biological Molecules and Networks.