拟南芥FCA低聚物的模块化体内组装成RNA 3'加工的凝聚物。

IF 8.3 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY EMBO Journal Pub Date : 2025-04-01 Epub Date: 2025-02-24 DOI:10.1038/s44318-025-00394-4
Geng-Jen Jang, Alex L Payne-Dwyer, Robert Maple, Zhe Wu, Fuquan Liu, Sergio G Lopez, Yanning Wang, Xiaofeng Fang, Mark C Leake, Caroline Dean
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引用次数: 0

摘要

我们对支持生物分子在体内凝聚的功能需求的理解仍然相对较差。拟南芥RNA结合蛋白开花控制位点A(开花控制位点A, FCA)存在于液体状核凝聚体中,该凝聚体在转录终止中起作用,促进拟南芥基因组中许多靶基因的近端聚腺苷化。为了进一步了解这些凝聚物在体内的特性,我们对植物核中内源水平稳定表达的FCA报告蛋白进行了单颗粒跟踪实验。SEC-MALS分析表明,FCA形成了一个核心低聚物,大小与四个分子一致;体内颗粒跟踪表明,该核心分子聚合成高阶颗粒。随后的组装通过卷曲的FLL2蛋白聚合成大分子凝聚物,这是FCA功能的遗传要求。因此,FLL2在较大的凝析油中主要与FCA共定位。FCA RRM结构域的错义突变(也是FCA功能的遗传要求)减小了FCA颗粒和凝聚物的平均大小,但没有扰乱核心低聚物。我们的工作指向FCA凝聚物的模块化结构,涉及通过相关RNA和FLL2相互作用将核心低聚物组装成功能大分子凝聚物的多聚化。
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Modular in vivo assembly of Arabidopsis FCA oligomers into condensates competent for RNA 3' processing.

Our understanding of the functional requirements underpinning biomolecular condensation in vivo is still relatively poor. The Arabidopsis RNA binding protein FLOWERING CONTROL LOCUS A (FCA) is found in liquid-like nuclear condensates that function in transcription termination, promoting proximal polyadenylation at many target genes in the Arabidopsis genome. To further understand the properties of these condensates in vivo, we used single-particle tracking experiments on FCA reporters stably expressed at endogenous levels in plant nuclei. SEC-MALS analyses suggested that FCA forms a core oligomer consistent with a size of four molecules; in vivo particle tracking indicated that this core molecule multimerizes into higher-order particles. The ensuing assemblies coalesce into macromolecular condensates via the coiled-coil protein FLL2, which is genetically required for FCA function. Accordingly, FLL2 predominately co-localizes with FCA in larger-sized condensates. A missense mutation in the FCA RRM domain, also genetically required for FCA function, reduced average size of both FCA particles and condensates, but did not perturb the core oligomer. Our work points to a modular structure for FCA condensates, involving multimerization of core oligomers assembled into functional macromolecular condensates via associated RNA and FLL2 interactions.

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来源期刊
EMBO Journal
EMBO Journal 生物-生化与分子生物学
CiteScore
18.90
自引率
0.90%
发文量
246
审稿时长
1.5 months
期刊介绍: The EMBO Journal has stood as EMBO's flagship publication since its inception in 1982. Renowned for its international reputation in quality and originality, the journal spans all facets of molecular biology. It serves as a platform for papers elucidating original research of broad general interest in molecular and cell biology, with a distinct focus on molecular mechanisms and physiological relevance. With a commitment to promoting articles reporting novel findings of broad biological significance, The EMBO Journal stands as a key contributor to advancing the field of molecular biology.
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