利用拉曼光谱和动态网络生物标志物理论鉴定lps诱导的RAW264.7巨噬细胞炎症模型中的细胞引爆点

IF 5.1 2区 化学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Molecules Pub Date : 2025-02-17 DOI:10.3390/molecules30040920
Akinori Taketani, Shota Koshiyama, Takayuki Haruki, Shota Yonezawa, Jun Tahara, Moe Yamazaki, Yusuke Oshima, Akinori Wada, Tsutomu Sato, Keiichi Koizumi, Isao Kitajima, Shigeru Saito
{"title":"利用拉曼光谱和动态网络生物标志物理论鉴定lps诱导的RAW264.7巨噬细胞炎症模型中的细胞引爆点","authors":"Akinori Taketani, Shota Koshiyama, Takayuki Haruki, Shota Yonezawa, Jun Tahara, Moe Yamazaki, Yusuke Oshima, Akinori Wada, Tsutomu Sato, Keiichi Koizumi, Isao Kitajima, Shigeru Saito","doi":"10.3390/molecules30040920","DOIUrl":null,"url":null,"abstract":"<p><p>Raman spectroscopy is a non-destructive spectroscopic technique that provides complex molecular information. It is used to examine the physiological and pathological responses of living cells, such as differentiation, malignancy, and inflammation. The responses of two cellular states, initial and full-blown inflammation, have mainly been investigated using a comparative analysis with Raman spectra. However, the tipping point of the inflammatory state transition remains unclear. Therefore, the present study attempted to identify the tipping point of inflammation using a cell model. We stimulated RAW264.7 mouse macrophages with lipopolysaccharide (LPS) and continuously collected Raman spectra every 2 h for 24 h from the initial and full-blown inflammation states. A Partial Least Squares analysis and Principal Component Analysis-Linear Discriminant Analysis predicted the tipping point as 14 h after the LPS stimulation. In addition, a Dynamical Network Biomarker (DNB) analysis, identifying the tipping point of a state transition in various phenomena, indicated that the tipping point was 14 h and identified tryptophan as a biomarker. The results of a multivariate analysis and DNB analysis show the cellular tipping point.</p>","PeriodicalId":19041,"journal":{"name":"Molecules","volume":"30 4","pages":""},"PeriodicalIF":5.1000,"publicationDate":"2025-02-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11858581/pdf/","citationCount":"0","resultStr":"{\"title\":\"Identification of the Cellular Tipping Point in the Inflammation Model of LPS-Induced RAW264.7 Macrophages Through Raman Spectroscopy and the Dynamical Network Biomarker Theory.\",\"authors\":\"Akinori Taketani, Shota Koshiyama, Takayuki Haruki, Shota Yonezawa, Jun Tahara, Moe Yamazaki, Yusuke Oshima, Akinori Wada, Tsutomu Sato, Keiichi Koizumi, Isao Kitajima, Shigeru Saito\",\"doi\":\"10.3390/molecules30040920\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Raman spectroscopy is a non-destructive spectroscopic technique that provides complex molecular information. It is used to examine the physiological and pathological responses of living cells, such as differentiation, malignancy, and inflammation. The responses of two cellular states, initial and full-blown inflammation, have mainly been investigated using a comparative analysis with Raman spectra. However, the tipping point of the inflammatory state transition remains unclear. Therefore, the present study attempted to identify the tipping point of inflammation using a cell model. We stimulated RAW264.7 mouse macrophages with lipopolysaccharide (LPS) and continuously collected Raman spectra every 2 h for 24 h from the initial and full-blown inflammation states. A Partial Least Squares analysis and Principal Component Analysis-Linear Discriminant Analysis predicted the tipping point as 14 h after the LPS stimulation. In addition, a Dynamical Network Biomarker (DNB) analysis, identifying the tipping point of a state transition in various phenomena, indicated that the tipping point was 14 h and identified tryptophan as a biomarker. The results of a multivariate analysis and DNB analysis show the cellular tipping point.</p>\",\"PeriodicalId\":19041,\"journal\":{\"name\":\"Molecules\",\"volume\":\"30 4\",\"pages\":\"\"},\"PeriodicalIF\":5.1000,\"publicationDate\":\"2025-02-17\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11858581/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Molecules\",\"FirstCategoryId\":\"92\",\"ListUrlMain\":\"https://doi.org/10.3390/molecules30040920\",\"RegionNum\":2,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"BIOCHEMISTRY & MOLECULAR BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Molecules","FirstCategoryId":"92","ListUrlMain":"https://doi.org/10.3390/molecules30040920","RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
引用次数: 0

摘要

拉曼光谱是一种非破坏性的光谱技术,可以提供复杂的分子信息。它用于检查活细胞的生理和病理反应,如分化、恶性肿瘤和炎症。两种细胞状态的反应,初始和全面的炎症,主要研究了拉曼光谱的比较分析。然而,炎症状态转变的临界点尚不清楚。因此,本研究试图利用细胞模型来确定炎症的临界点。我们用脂多糖(LPS)刺激RAW264.7小鼠巨噬细胞,在初始和完全炎症状态下,每2 h连续收集24 h的拉曼光谱。偏最小二乘分析和主成分分析-线性判别分析预测LPS刺激后14 h为引爆点。此外,动态网络生物标志物(DNB)分析,确定了各种现象中状态转变的临界点,表明临界点为14小时,并确定色氨酸为生物标志物。多变量分析和DNB分析的结果显示了细胞临界点。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

摘要图片

摘要图片

摘要图片

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Identification of the Cellular Tipping Point in the Inflammation Model of LPS-Induced RAW264.7 Macrophages Through Raman Spectroscopy and the Dynamical Network Biomarker Theory.

Raman spectroscopy is a non-destructive spectroscopic technique that provides complex molecular information. It is used to examine the physiological and pathological responses of living cells, such as differentiation, malignancy, and inflammation. The responses of two cellular states, initial and full-blown inflammation, have mainly been investigated using a comparative analysis with Raman spectra. However, the tipping point of the inflammatory state transition remains unclear. Therefore, the present study attempted to identify the tipping point of inflammation using a cell model. We stimulated RAW264.7 mouse macrophages with lipopolysaccharide (LPS) and continuously collected Raman spectra every 2 h for 24 h from the initial and full-blown inflammation states. A Partial Least Squares analysis and Principal Component Analysis-Linear Discriminant Analysis predicted the tipping point as 14 h after the LPS stimulation. In addition, a Dynamical Network Biomarker (DNB) analysis, identifying the tipping point of a state transition in various phenomena, indicated that the tipping point was 14 h and identified tryptophan as a biomarker. The results of a multivariate analysis and DNB analysis show the cellular tipping point.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Molecules
Molecules 化学-有机化学
CiteScore
7.40
自引率
8.70%
发文量
7524
审稿时长
1.4 months
期刊介绍: Molecules (ISSN 1420-3049, CODEN: MOLEFW) is an open access journal of synthetic organic chemistry and natural product chemistry. All articles are peer-reviewed and published continously upon acceptance. Molecules is published by MDPI, Basel, Switzerland. Our aim is to encourage chemists to publish as much as possible their experimental detail, particularly synthetic procedures and characterization information. There is no restriction on the length of the experimental section. In addition, availability of compound samples is published and considered as important information. Authors are encouraged to register or deposit their chemical samples through the non-profit international organization Molecular Diversity Preservation International (MDPI). Molecules has been launched in 1996 to preserve and exploit molecular diversity of both, chemical information and chemical substances.
期刊最新文献
Correction: Azam et al. Removal of Chromium(III) and Cadmium(II) Heavy Metal Ions from Aqueous Solutions Using Treated Date Seeds: An Eco-Friendly Method. Molecules 2021, 26, 3718. Isoniazid-Saccharin Salts: Synthesis, Structural Aspects, Thermal Properties and Spectroscopic Characterization. Inorganic Carbon Modulates Emulsification Activity and Transcriptional Responses in Vreelandella zhaodongensis BS253. Discovery and Putative Perception Mechanisms of Novel Umami Peptides from Ruditapes philippinarum Cooking Liquid: In Silico Screening, Molecular Docking, Sensory Evaluation, and STC-1 Cell-Based Validation. Synthesis of a Mixed Bis(imino)acenaphthene (BIAN) Ligand Using Aluminum Transfer Reagents.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1