整个生物体的全基因组CRISPR筛选路线图。

IF 8.4 Q1 CELL BIOLOGY Cell genomics Pub Date : 2025-03-12 Epub Date: 2025-02-24 DOI:10.1016/j.xgen.2025.100777
Tess K Fallon, Kristin A Knouse
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引用次数: 0

摘要

在生物体中进行全基因组CRISPR筛选具有回答哺乳动物生理学和疾病长期存在的问题的巨大潜力。然而,将这种强大的技术应用于体内存在独特的挑战,包括将全基因组sgRNA文库传递到适当的细胞类型,实现文库的充分覆盖,以及选择感兴趣的表型。在这篇综述中,我们重点介绍了sgRNA传递、文库设计和表型读取方面的最新进展,这些进展有助于克服这些技术挑战,从而为越来越多的组织和问题带来高通量遗传解剖。我们对这些领域正在进行的创新的潜力感到兴奋,最终能够在生物体中任何感兴趣的细胞类型中进行全基因组CRISPR筛选,从而允许对哺乳动物生理学和疾病的各种问题进行前所未有的研究。
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A roadmap toward genome-wide CRISPR screening throughout the organism.

Genome-wide CRISPR screening in the organism has tremendous potential to answer long-standing questions of mammalian physiology and disease. However, bringing this powerful technology in vivo presents unique challenges, including delivering a genome-wide sgRNA library to the appropriate cell type, achieving sufficient coverage of the library, and selecting for the phenotype of interest. In this review, we highlight recent advances in sgRNA delivery, library design, and phenotypic readout that can help overcome these technical challenges and thereby bring high-throughput genetic dissection to an increasing number of tissues and questions. We are excited about the potential for ongoing innovation in these areas to ultimately enable genome-wide CRISPR screening in any cell type of interest in the organism, allowing for unprecedented investigation into diverse questions of mammalian physiology and disease.

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